Orthology_analysis

general python scripts for analysis of orthologs

Name		Name	Last commit message	Last commit date
Latest commit History 249 Commits
Bioproject2info.py		Bioproject2info.py
IQ3model2tree.py		IQ3model2tree.py
IQ3spyder2model.py		IQ3spyder2model.py
README.md		README.md
alg2order.py		alg2order.py
algNodouble.py		algNodouble.py
biosample2tissue.py		biosample2tissue.py
changeNoaa.py		changeNoaa.py
concat_fasta.py		concat_fasta.py
config.pipeline.dc		config.pipeline.dc
config.pipeline_cliff_pep.dc		config.pipeline_cliff_pep.dc
config.pipeline_curnagl_pep.dc		config.pipeline_curnagl_pep.dc
config.pipeline_wallace.dc		config.pipeline_wallace.dc
config.pipeline_wallace_pep.dc		config.pipeline_wallace_pep.dc
convert_omaids.py		convert_omaids.py
countTaxa.py		countTaxa.py
create_splicefiles.py		create_splicefiles.py
download_data.py		download_data.py
fastevolgenes.py		fastevolgenes.py
glob		glob
hog2members.py		hog2members.py
land_plants.py		land_plants.py
malaria_scripts.py		malaria_scripts.py
mcscanFormats.py		mcscanFormats.py
mscscan_ksPlot.py		mscscan_ksPlot.py
ncbi2sra.py		ncbi2sra.py
ncbiGenome2species.py		ncbiGenome2species.py
nexus2newick.py		nexus2newick.py
obo2query.py		obo2query.py
oma2download.py		oma2download.py
oma_plantsHOGs.py		oma_plantsHOGs.py
omafasta2format.py		omafasta2format.py
omahog2download.py		omahog2download.py
ortho2cat.py		ortho2cat.py
ortho2phylome.py		ortho2phylome.py
path2concat.py		path2concat.py
path2model.py		path2model.py
plant_specific.h5		plant_specific.h5
qtl2gene.py		qtl2gene.py
run_simple_tree.sh		run_simple_tree.sh
sp2taxaid.py		sp2taxaid.py
taxaid2group.py		taxaid2group.py
tomato_spp2.py		tomato_spp2.py
trait2vec.py		trait2vec.py
tree2branch.py		tree2branch.py

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