v1.1.3

What's Changed

• chore: update publication docs by @jpuerto-psc in #1486
• s/relevent/relevant/ in several dir-schema file descriptions by @djbordelon in #1493
• Fixing shared upload top-level dir check by @gesinaphillips in #1494
• Update Visium (with probes) to v3.9 (add spaceranger optional) by @djbordelon in #1495
• Removing url-status-cache.json to avoid issues with permissions on deployment by @sunset666 in #1491
• Bugfix plugin error by @gesinaphillips in #1496
• Add Illumina Spatial Technology directory schema (beta) by @djbordelon in #1498
• Dbordelon/illumina spatial 0 by @jpuerto-psc in #1499
• Replace URL for generating 10X Genomics layout files in 4 Visium assays by @djbordelon in #1500

Full Changelog: v1.1.2...v1.1.3

v1.1.2

What's Changed

• Update CosMX Proteomics directory schema to v2.2 by @djbordelon in #1485
• Visium HD v2.1 by @djbordelon in #1487
• Visium (no probes) v3.6 directory schema by @djbordelon in #1488
• Visium (with probes) v3.8 directory schema by @djbordelon in #1489
• Xenium v3.9 directory schema by @djbordelon in #1490

Full Changelog: v1.1.1...v1.1.2

v1.1.1

What's Changed

• Dbordelon/cycif 21 by @djbordelon in #1484

Full Changelog: v1.1.0...v1.1.1

v1.1.0

This release adds additional dataset checks to make sure that parent_sample_ids are either block/section/suspension.

v1.0.1

What's Changed

• Update GeoMX NGS dir schema to 2.11 by @djbordelon in #1473
• Add STARmap v2.0 directory schema by @djbordelon in #1474
• Add Raman Imaging passthrough directory schema by @djbordelon in #1475
• Update 4i description with ometiff channels spec link by @djbordelon in #1476
• Update CODEX with ome tiff channels csv spec by @djbordelon in #1477
• update segmentation-mask to v2.7 by @djbordelon in #1478
• create CLAP passthrough dir schema v2.0 by @djbordelon in #1479
• Jmuerto/clap renaming by @jpuerto-psc in #1480
• Jmuerto/comet by @jpuerto-psc in #1481
• Fix tests by @gesinaphillips in #1482

Full Changelog: v1.0.0...v1.0.1

v1.0.0

Removes support for Python 3.9, adds support for Python 3.13.

v0.0.24-ingest-api-python3.13

Special release derived from v0.0.24

• Update PyPI dependencies for compatibility with the HuBMAP ingest-api Docker image (Python 3.13).

NOTE: HuBMAP ingest-api will need additional updates in order to use the latest IVT release.

Full Changelog: v0.0.24...v0.0.24-ingest-api-python3.13

v0.0.43

What's Changed

• Testing and error reporting updates by @gesinaphillips in #1466
• chore: Update docs by @jpuerto-psc in #1467
• Jmuerto/epic docs by @jpuerto-psc in #1468
• chore: Update docs by @jpuerto-psc in #1469

Full Changelog: v0.0.42...v0.0.43

v0.0.42

What's Changed

• chore: Update docs by @jpuerto-psc in #1464
• CosMX Proteomics dir schema v2.0 -> 2.1 by @djbordelon in #1465

Full Changelog: v0.0.41...v0.0.42

v0.0.41

What's Changed

• Fixing tests by @gesinaphillips in #1463

Full Changelog: v0.0.40...v0.0.41