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Merge pull request #2 from sr-murthy/master
Various updates
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‎Dockerfile

+37-42
Original file line numberDiff line numberDiff line change
@@ -4,64 +4,59 @@ MAINTAINER The HDF-EOS Tools and Information Center <[email protected]>
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ENV HOME /root
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RUN apt-get update
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RUN apt-get -yq install gcc \
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build-essential \
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wget \
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bzip2 \
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tar \
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libghc-zlib-dev \
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libjpeg-dev \
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gfortran \
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bison \
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flex \
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file
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COPY ["./apt.txt", "./"]
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#Build HDF4
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RUN wget https://observer.gsfc.nasa.gov/ftp/edhs/hdfeos/latest_release/hdf-4.2.13.tar.gz; \
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tar zxvf hdf-4.2.13.tar.gz; \
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cd hdf-4.2.13; \
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RUN apt update && apt install -yq $(grep -vE "^\s*#" ./apt.txt)
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#Build HDF4 lib.
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ARG HDF4_VER=4.2.13
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RUN wget https://observer.gsfc.nasa.gov/ftp/edhs/hdfeos/latest_release/hdf-${HDF4_VER}.tar.gz; \
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tar zxvf hdf-${HDF4_VER}.tar.gz; \
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cd hdf-${HDF4_VER}; \
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./configure --prefix=/usr/local/ --disable-netcdf; \
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make && make check && make install; \
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cd ..; \
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rm -rf /hdf-4.2.13 /hdf-4.2.13.tar.gz
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rm -rf /hdf-${HDF4_VER} /hdf-${HDF4_VER}.tar.gz
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#Build HDF-EOS2
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RUN wget https://observer.gsfc.nasa.gov/ftp/edhs/hdfeos/previous_releases/HDF-EOS2.19v1.00.tar.Z; \
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tar zxvf HDF-EOS2.19v1.00.tar.Z; \
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#Build HDF-EOS2 lib.
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ARG HDFEOS_VER=2.19v1.00
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RUN wget https://observer.gsfc.nasa.gov/ftp/edhs/hdfeos/previous_releases/HDF-EOS${HDFEOS_VER}.tar.Z; \
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tar zxvf HDF-EOS${HDFEOS_VER}.tar.Z; \
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cd hdfeos; \
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./configure --prefix=/usr/local/ --enable-install-include --with-hdf4=/usr/local; \
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make && make check && make install; \
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cd ..; \
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rm -rf /hdfeos /HDF-EOS2.19v1.00.tar.Z
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rm -rf /hdfeos /HDF-EOS${HDFEOS_VER}.tar.Z
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# Build HDF5
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RUN wget https://observer.gsfc.nasa.gov/ftp/edhs/hdfeos5/latest_release/hdf5-1.8.19.tar.gz; \
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tar zxvf hdf5-1.8.19.tar.gz; \
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cd hdf5-1.8.19; \
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# Build HDF5 lib.
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ARG HDF5_VER=5-1.8.19
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RUN wget https://observer.gsfc.nasa.gov/ftp/edhs/hdfeos5/latest_release/hdf${HDF5_VER}.tar.gz; \
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tar zxvf hdf${HDF5_VER}.tar.gz; \
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cd hdf${HDF5_VER}; \
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./configure --prefix=/usr/local/; \
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make && make check && make install; \
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cd ..; \
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rm -rf /hd5f-1.8.19 /hdf5-1.8.19.tar.gz
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# Build netCDF.
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RUN NETCDF_C_VERSION="4.4.1.1" \
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&& wget ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-${NETCDF_C_VERSION}.tar.gz -P /tmp \
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&& tar -xf /tmp/netcdf-${NETCDF_C_VERSION}.tar.gz -C /tmp \
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&& cd /tmp/netcdf-${NETCDF_C_VERSION} \
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&& CPPFLAGS=-I/usr/local/include LDFLAGS=-L/usr/local/lib ./configure --prefix=/usr/local \
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&& cd /tmp/netcdf-${NETCDF_C_VERSION} \
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rm -rf /hdf${HDF5_VER}/hdf${HDF5_VER}.tar.gz
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# Build netCDF C lib.
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ARG NETCDF_C_VER=4.4.1.1
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RUN wget ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-${NETCDF_C_VER}.tar.gz -P /tmp \
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&& tar -xf /tmp/netcdf-${NETCDF_C_VER}.tar.gz -C /tmp \
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&& cd /tmp/netcdf-${NETCDF_C_VER} \
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&& CPPFLAGS=-I/usr/local/include LDFLAGS=-L/usr/local/lib LD_LIBRARY_PATH=-L/usr/local/lib ./configure --prefix=/usr/local --enable-shared \
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&& cd /tmp/netcdf-${NETCDF_C_VER} \
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&& make \
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&& cd /tmp/netcdf-${NETCDF_C_VER} \
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&& make install \
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&& rm -rf /tmp/netcdf-${NETCDF_C_VERSION}
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&& rm -rf /tmp/netcdf-${NETCDF_C_VER}
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# Build H4CF Conversion Toolkit
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RUN wget http://hdfeos.org/software/h4cflib/h4cflib_1.2.tar.gz; \
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tar zxvf h4cflib_1.2.tar.gz; \
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cd h4cflib_1.2; \
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ARG H4CF_VER=1.2
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RUN wget http://hdfeos.org/software/h4cflib/h4cflib_${H4CF_VER}.tar.gz; \
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tar zxvf h4cflib_${H4CF_VER}.tar.gz; \
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cd h4cflib_${H4CF_VER} \
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&& CPPFLAGS=-I/usr/local/include LDFLAGS=-L/usr/local/lib LD_LIBRARY_PATH=-L/usr/local/lib \
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./configure --prefix=/usr/local/ --with-hdf4=/usr/local/ --with-hdfeos2=/usr/local/ --with-netcdf=/usr/local/; \
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make && make check && make install; \
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make && make install; \
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cd ..; \
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rm -rf /h4cflib_1.2 /hf4cflib_1.2.tar.gz
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rm -rf /h4cflib_${H4CF_VER} /hf4cflib_${H4CF_VER}.tar.gz

‎README.md

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# docker-h4cf
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Ubuntu based Docker container for HDF4 CF Conversion Toolkit
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## Ubuntu based Docker container for HDF4 CF Conversion Toolkit
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The Docker file `Dockerfile` sources an Apt package file named `apt.txt`, which lists the Apt packages required to build the image.
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Build the image with
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docker build -f Dockerfile \
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[--build-arg HDF4_VER=<HDF4 lib. version string, default 4.2.13>] \
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[--build-arg HDFEOS_VER=<HDFEOS lib. version string, default 2.19v1.00>] \
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[--build-arg HDF5_VER=<HDF5 lib. version string, default 5-1.8.19>] \
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[--build-arg NETCDF_C_VER=<NetCDF C lib. version string, default 4.4.1.1>] \
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[--build-arg H4CF_VER=<H4CF conversion toolkit version string, default 1.2>]
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-t <image name> .
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The build arguments `HDF4_VER`, `HDFEOS_VER`, `HDF5_VER`, `NETCDF_C_VER`, `H4CF_VER` are optional - default versions are used within the Docker file, as indicated above.
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Run the image in a detached container with
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docker run --name <container name> -itd <image name>
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Enter the container in a Bash shell with
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docker exec -it <container name> bash

‎apt.txt

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gcc
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build-essential
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curl
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wget
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bzip2
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tar
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libghc-zlib-dev
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libjpeg-dev
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gfortran
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bison
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flex
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file

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