Added a new workflow for WebAtlas2.0 portal-specific data generation #153
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…t webatlas2.0 processing part silently
…files for webatlas2.0
…o the project's assets directory in the portal code - it's not needed there
…prevent the pipeline from outputting certain warnings
… to project_annotations.tsv file(s) - as this mapping is project-specific
…e specified in project_annotations.tsv
… listed continuous entities (er.g. histopath in GBM)
… - so that intenstities are shown correctly in thumbnails on the portal when the range is between 0 and 1
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Added a new workflow for WebAtlas2.0 portal-specific data generation: Generate_webatlas2_data. It is meant to be run after the Full_pipeline workflow has completed, with the same params.yaml file as Full_pipeline.