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My question is basically the title - for the column of clonal frequency in allele-specific copy number data of input, is this equivalent to purity / abberrant cell fraction from ascat (eg, in output, one sample is assigned with one number of purity / abberrant cell fraction for all segments)?
Asking as we don't have direct allele-specific copy number from sequencing but only deduction from ascat. Wondering if we can proceed using ascat.
Thank you very much!!
The text was updated successfully, but these errors were encountered:
Hi there!
My question is basically the title - for the column of
clonal frequency
in allele-specific copy number data of input, is this equivalent topurity / abberrant cell fraction
from ascat (eg, in output, one sample is assigned with one number ofpurity / abberrant cell fraction
for all segments)?Asking as we don't have direct allele-specific copy number from sequencing but only deduction from ascat. Wondering if we can proceed using ascat.
Thank you very much!!
The text was updated successfully, but these errors were encountered: