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Pull requests: galaxyproject/tools-iuc

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311 Open 5,143 Closed
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Pull requests list

Update artic
#6693 opened Jan 24, 2025 by ammaraziz Loading…
3 of 5 tasks
Start updating ENA upload to ena-upload-cli 0.7.5
#6690 opened Jan 23, 2025 by bedroesb Loading…
3 of 5 tasks
3
[WIP] EMBOSS v6
#6687 opened Jan 22, 2025 by shiltemann Loading…
4 of 5 tasks
Update MetaBAT2 from 2.15 to 2.17
#6686 opened Jan 21, 2025 by SantaMcCloud Loading…
3 of 5 tasks
2
Add drug2cell tool
#6684 opened Jan 21, 2025 by Mennayousef Loading…
16
Updating tools/homer from version 4.11 to 5.1
#6682 opened Jan 20, 2025 by gxydevbot Loading…
Update pharokka DM
#6680 opened Jan 16, 2025 by paulzierep Loading…
3 of 5 tasks
Updating tools/stringtie from version 2.2.3 to 3.0.0
#6673 opened Jan 13, 2025 by gxydevbot Loading…
hicBuildMatrix SAM inputs changed from repeat to plain params
#6670 opened Jan 10, 2025 by pavanvidem Loading…
3 of 5 tasks
12
Add data manager for clair3 models
#6659 opened Jan 7, 2025 by pvanheus Loading…
2 of 5 tasks
9
Updating tools/lineagespot from version 1.6.0 to 1.10.0
#6657 opened Jan 6, 2025 by gxydevbot Loading…
Updating tools/cemitool from version 1.26.0 to 1.30.0
#6656 opened Jan 6, 2025 by gxydevbot Loading…
Updating tools/infercnv from version 1.20.0 to 1.22.0
#6654 opened Dec 30, 2024 by gxydevbot Loading…
Updating tools/dexseq from version 1.48.0 to 1.52.0
#6653 opened Dec 30, 2024 by gxydevbot Loading…
Updating tools/annotatemyids from version 3.18.0 to 3.20.0
#6652 opened Dec 30, 2024 by gxydevbot Loading…
update pharokka to latest version
#6651 opened Dec 28, 2024 by bgruening Loading…
3 of 5 tasks
9
Updating tools/lastz from version 1.04.22 to 1.04.41
#6649 opened Dec 23, 2024 by gxydevbot Loading…
5
Add deeparg
#6646 opened Dec 19, 2024 by hugolefeuvre Loading…
3 of 5 tasks
27
Fastp fixes
#6642 opened Dec 16, 2024 by bernt-matthias Loading…
3 of 5 tasks
1
Updating tools/umi_tools from version 1.1.5 to 1.1.6
#6639 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/tximport from version 1.30.0 to 1.34.0
#6638 opened Dec 16, 2024 by gxydevbot Loading…
1
Updating tools/pbmm2 from version 1.16.0 to 1.16.99
#6637 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/decontam from version 1.22.0 to 1.26.0
#6634 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/cutadapt from version 4.9 to 5.0
#6633 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/ancombc from version 1.4.0 to 2.8.0
#6632 opened Dec 16, 2024 by gxydevbot Loading…
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