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Suggest fqtk in DemuxFastqs (#939)
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nh13 authored Sep 26, 2023
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2 changes: 2 additions & 0 deletions src/main/scala/com/fulcrumgenomics/fastq/DemuxFastqs.scala
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Expand Up @@ -202,6 +202,8 @@ object DemuxFastqs {
"""
|Performs sample demultiplexing on FASTQs.
|
|**Please see https://github.com/fulcrumgenomics/fqtk for a faster and supported replacement**
|
|The sample barcode for each sample in the sample sheet will be compared against the sample barcode bases extracted from
|the FASTQs, to assign each read to a sample. Reads that do not match any sample within the given error tolerance
|will be placed in the 'unmatched' file.
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