ood-postgres

Open OnDemand PostgreSQL app

FASRC Cannon

If you are running this app on FASRC's Cannon cluster, you can simply clone to ~/.fasrcood/dev and it will show in your Sandbox Apps.

Site-specific modifications

If you wish to use this app in a different cluster, some files need to edited to conform to your site's OOD implementation. All necessary and potential modifications are commented with a site-specific tag. For example, the file form.yml has for slurm partition:

  bc_queue:
# site-specific: change default partition
    value: "shared"

List of files to edit:

1. form.yml
2. manifest.yml
3. template/before.sh.erb

This app assumes the cluster uses slurm as the scheduler. If you use a different scheduler, you wil likely need to modify other files.

Singularity containers

You can build the Singularity containers using the Singularity definition files provided in this repository:

• PostGIS version
• pgvector version