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Redocument
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athowes committed Oct 22, 2024

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alexsnaps Alex Snaps
1 parent f0d56ad commit 93a4d61
Showing 8 changed files with 13 additions and 36 deletions.
11 changes: 0 additions & 11 deletions NAMESPACE
Original file line number Diff line number Diff line change
@@ -3,12 +3,8 @@
S3method(add_mean_sd,default)
S3method(add_mean_sd,gamma_samples)
S3method(add_mean_sd,lognormal_samples)
<<<<<<< HEAD
S3method(as_direct_model,data.frame)
S3method(as_latent_individual,data.frame)
=======
S3method(as_latent_individual,epidist_linelist)
>>>>>>> 044a9bdb (Refactor validation functionality)
S3method(epidist,default)
S3method(epidist_family_model,default)
S3method(epidist_family_model,epidist_latent_individual)
@@ -21,11 +17,7 @@ S3method(epidist_formula_model,epidist_latent_individual)
S3method(epidist_model_prior,default)
S3method(epidist_stancode,default)
S3method(epidist_stancode,epidist_latent_individual)
<<<<<<< HEAD
S3method(epidist_validate,default)
S3method(epidist_validate,epidist_direct_model)
=======
>>>>>>> 044a9bdb (Refactor validation functionality)
S3method(epidist_validate,epidist_latent_individual)
S3method(epidist_validate_data,default)
S3method(epidist_validate_model,default)
@@ -47,11 +39,8 @@ export(epidist_validate_data)
export(epidist_validate_model)
export(filter_obs_by_obs_time)
export(filter_obs_by_ptime)
<<<<<<< HEAD
export(is_direct_model)
=======
export(is_epidist_linelist)
>>>>>>> 044a9bdb (Refactor validation functionality)
export(is_latent_individual)
export(observe_process)
export(predict_delay_parameters)
10 changes: 10 additions & 0 deletions R/globals.R
Original file line number Diff line number Diff line change
@@ -1,10 +1,20 @@
# Generated by roxyglobals: do not edit by hand

utils::globalVariables(c(
".data", # <epidist_diagnostics>
"samples", # <epidist_diagnostics>
".data", # <as_direct_model.data.frame>
".data", # <as_latent_individual.epidist_linelist>
"woverlap", # <epidist_stancode.epidist_latent_individual>
".data", # <observe_process>
".data", # <filter_obs_by_obs_time>
".data", # <filter_obs_by_ptime>
":=", # <filter_obs_by_ptime>
".data", # <add_mean_sd.lognormal_samples>
".data", # <add_mean_sd.gamma_samples>
"rlnorm", # <simulate_secondary>
".data", # <simulate_secondary>
".data", # <.replace_prior>
"prior_new", # <.replace_prior>
"source_new", # <.replace_prior>
NULL
11 changes: 0 additions & 11 deletions man/as_latent_individual.Rd

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4 changes: 0 additions & 4 deletions man/epidist_family_model.epidist_latent_individual.Rd

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4 changes: 0 additions & 4 deletions man/epidist_formula_model.epidist_latent_individual.Rd

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2 changes: 1 addition & 1 deletion man/is_direct_model.Rd

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1 change: 1 addition & 0 deletions man/is_epidist_linelist.Rd

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6 changes: 1 addition & 5 deletions man/is_latent_individual.Rd

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