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Update R/opts.R
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Co-authored-by: Sebastian Funk <[email protected]>
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seabbs and sbfnk authored Jan 17, 2025
1 parent 6184ab9 commit 95e4812
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5 changes: 3 additions & 2 deletions R/opts.R
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Expand Up @@ -328,8 +328,9 @@ trunc_opts <- function(dist = Fixed(0), default_cdf_cutoff = 0.001,
#' @param pop_period Character string, defaulting to "forecast". Controls when
#' susceptible population adjustment is applied. "forecast" only applies the
#' adjustment to forecasts while "all" applies it to both data and forecasts.
#' Note that with "forecast", Rt estimates are unadjusted for susceptible
#' depletion but posterior predictions are adjusted.
#' Note that with "all", Rt estimates are unadjusted for susceptible
#' depletion but posterior predictions of infections and reports are

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#' adjusted.
#'
#' @param gp_on Character string, defaulting to "R_t-1". Indicates how the
#' Gaussian process, if in use, should be applied to Rt. Currently supported
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