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Fix docs #119

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Merged
dschwoerer merged 5 commits into from
May 5, 2026
Merged

Fix docs #119

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a1f8567
Fix exception
dschwoerer May 4, 2026
905d2d9
Ensure tqdm is installed
dschwoerer May 4, 2026
d4c7e0a
Pass on outOfDomain flag
dschwoerer May 4, 2026
f1e01c6
Plot found fix points
dschwoerer May 5, 2026
4550934
Switch to inline plotting for notebook
dschwoerer May 5, 2026
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17 changes: 5 additions & 12 deletions docs/examples/poincare.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -5,8 +5,7 @@
"id": "e55d344d-fbf8-495b-a88d-db0c89d41d0e",
"metadata": {},
"source": [
"# How to create a poincare plot\n",
"\n"
"# How to create a poincare plot"
]
},
{
Expand Down Expand Up @@ -142,14 +141,6 @@
" plt.gca().set_aspect(1)"
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "c5cf62fa-2a66-4e2f-ba33-6bf624fb6535",
"metadata": {},
"outputs": [],
"source": []
},
{
"cell_type": "markdown",
"id": "abb1860f-ffae-45bf-a1c5-52c32d50a91f",
Expand Down Expand Up @@ -197,7 +188,7 @@
" else:\n",
" print(f\"Found: {new}\")\n",
" found.append(new)\n",
" except FixPointConvergenceError, OutOfDomainError:\n",
" except (FixPointConvergenceError, OutOfDomainError):\n",
" # Not close to a fix point\n",
" pass\n",
" except IndexError:\n",
Expand All @@ -212,7 +203,9 @@
"metadata": {},
"outputs": [],
"source": [
"found"
"plt.figure()\n",
"plt.scatter(pnc0[..., 0], pnc0[..., 1], s=0.1, color=\"black\")\n",
"plt.scatter(*np.array(found).T, s=1, color=\"red\")"
]
}
],
Expand Down
2 changes: 1 addition & 1 deletion docs/examples/setup_plt.py
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Original file line number Diff line number Diff line change
Expand Up @@ -6,6 +6,6 @@
get_ipython().run_line_magic("matplotlib", "inline") # noqa: F821
figsize = 10.0
else:
get_ipython().run_line_magic("matplotlib", "notebook") # noqa: F821
get_ipython().run_line_magic("matplotlib", "inline") # noqa: F821
figsize = 6.0
plt.rcParams["figure.figsize"] = [figsize, figsize]
2 changes: 2 additions & 0 deletions requirements.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -25,3 +25,5 @@ sphinx-argparse-cli ; python_version > "3.6"
nbsphinx >= 0.8.6
ipykernel
ipywidgets

tqdm
2 changes: 2 additions & 0 deletions setup.cfg
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Expand Up @@ -58,6 +58,7 @@ docs =
sphinx >= 1.4
sphinx-argparse-cli
nbsphinx >= 0.8.6
tqdm

full =
matplotlib>=3.4
Expand All @@ -67,6 +68,7 @@ full =
sphinx-argparse-cli
nbsphinx >= 0.8.6
numba
tqdm

[build_sphinx]
project = $metadata.name
Expand Down
2 changes: 1 addition & 1 deletion xemc3/core/flt_emc_like.py
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Expand Up @@ -293,4 +293,4 @@ def trace4(self, pnts, num, ood=False):
pnts = np.array(pnts)
if len(pnts.shape) == 1:
return trace4(pnts, self.meshes, num, ood=ood)
return np.array([trace4(p, self.meshes, num) for p in pnts])
return np.array([trace4(p, self.meshes, num, ood=ood) for p in pnts])
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