Improve restraint mask generation#11

Merged

drroe merged 10 commits intomasterfrom

deal.with.modified.res

Feb 6, 2026

Commits on Feb 6, 2026

Check for CPPTRAJ before trying to run tests
Daniel R. Roe
committed
Save each residue status
Daniel R. Roe
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Properly recognize glycam protein residues
Daniel R. Roe
committed
Record consecutive stretches of residues of the same type for the purposes of generating mask expressions
Daniel R. Roe
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Select atoms by groups of similarly typed residues
Daniel R. Roe
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Make backbone mask expression like previous behavior. Hide some debug info
Daniel R. Roe
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Only need tmp.resid for debug
Daniel R. Roe
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Add test saves
Daniel R. Roe
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Enable modified residues test
Daniel R. Roe
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Remove old mask code
Daniel R. Roe
committed