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docs: expand on MMAS VCF format entry
Test #335: Commit ae79cf9 pushed by davidlougheed
January 13, 2025 20:15 42s master
January 13, 2025 20:15 42s
chore: bump version to 0.21.0a2
Test #334: Commit f4e2b58 pushed by davidlougheed
January 13, 2025 20:14 46s master
January 13, 2025 20:14 46s
chore: bump version to 0.21.0a1
Test #333: Commit e192ba7 pushed by davidlougheed
January 8, 2025 20:26 43s master
January 8, 2025 20:26 43s
January 8, 2025 20:23 47s
Test
Test #331: by davidlougheed
January 7, 2025 14:39 49s master
January 7, 2025 14:39 49s
Test
Test #330: by davidlougheed
January 7, 2025 14:29 45s master
January 7, 2025 14:29 45s
fix(mi): logging error
Test #329: Commit be4a61a pushed by davidlougheed
December 20, 2024 18:25 43s master
December 20, 2024 18:25 43s
feat(mi): add STRdust alias for generic VCF calculator
Test #328: Commit 6266152 pushed by davidlougheed
December 20, 2024 17:57 47s master
December 20, 2024 17:57 47s
feat(call): subset reads with long tracts for consensus
Test #327: Commit b93bcf3 pushed by davidlougheed
December 20, 2024 17:10 43s master
December 20, 2024 17:10 43s
chore(call): revert max read cn iters to 50
Test #326: Commit dcaf13e pushed by davidlougheed
December 19, 2024 19:34 43s master
December 19, 2024 19:34 43s
chore(call): rm print debugging + add iters to read log
Test #325: Commit e02f86d pushed by davidlougheed
December 19, 2024 18:30 45s master
December 19, 2024 18:30 45s
chore(call): tweak logic for starting count offsets
Test #324: Commit 9dbe371 pushed by davidlougheed
December 19, 2024 18:20 47s master
December 19, 2024 18:20 47s
print debug
Test #323: Commit 143adf4 pushed by davidlougheed
December 19, 2024 18:12 48s master
December 19, 2024 18:12 48s
chore(call): better read repeat count log msg + print debug
Test #322: Commit fedf4a8 pushed by davidlougheed
December 19, 2024 18:06 50s master
December 19, 2024 18:06 50s
chore(call): parametrize --max-rcn-iters
Test #321: Commit dd0f419 pushed by davidlougheed
December 19, 2024 18:00 43s master
December 19, 2024 18:00 43s
feat(call): don't skip supplemental reads by default
Test #320: Commit b3eb2ed pushed by davidlougheed
December 13, 2024 18:51 45s master
December 13, 2024 18:51 45s
refact: rewrite Optional/Union as py3.10 union op
Test #319: Commit a357704 pushed by davidlougheed
December 10, 2024 18:12 46s master
December 10, 2024 18:12 46s
chore(mi): log all MI values progressively
Test #318: Commit 6bdfb07 pushed by davidlougheed
December 10, 2024 15:20 1m 6s master
December 10, 2024 15:20 1m 6s
feat(mi): sequence-wise MI calculations
Test #317: Commit 21d333b pushed by davidlougheed
December 9, 2024 21:36 48s master
December 9, 2024 21:36 48s
feat(mi): add generic VCF length-based calculator
Test #316: Commit ad9015f pushed by davidlougheed
December 5, 2024 21:15 44s master
December 5, 2024 21:15 44s
perf(call): cache get_n_alleles calls by contig
Test #315: Commit 697c7be pushed by davidlougheed
December 5, 2024 15:01 54s master
December 5, 2024 15:01 54s
chore: bump version to 0.19.0
Test #314: Commit 0b28c7a pushed by davidlougheed
December 4, 2024 19:32 45s master
December 4, 2024 19:32 45s
chore(call): rm outdated comment
Test #313: Commit ec3e5b7 pushed by davidlougheed
December 4, 2024 19:25 44s master
December 4, 2024 19:25 44s
chore(deps): update strkit_rust_ext to 0.18.2
Test #312: Commit ae541b3 pushed by davidlougheed
December 3, 2024 15:46 1m 16s master
December 3, 2024 15:46 1m 16s
perf(call): update strkit_rust_ext to 0.18.1
Test #311: Commit 7294507 pushed by davidlougheed
November 25, 2024 19:49 49s master
November 25, 2024 19:49 49s