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WiP: Branch with auto converted linkml model #381

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21e7e9c
[DATALAD RUNCMD] Auto-convert the model
yarikoptic Mar 10, 2026
f109ff4
Now we will sanitize the converted model addresses
yarikoptic Mar 13, 2026
7580f80
more sanitization
yarikoptic Mar 13, 2026
f130f4f
More Sanitization applied
yarikoptic Mar 13, 2026
0a8ef6b
Reextracted model (now less clutter and with spaces)
yarikoptic Mar 13, 2026
63dd301
feat: provide `prefixes` definition in the overlay file
candleindark Mar 13, 2026
f8125d0
Added linkml: prefix and sorted all the entries
yarikoptic Mar 13, 2026
7c5077a
Provide default prefix to be custom dandi_default
yarikoptic Mar 13, 2026
3485245
Reextracted model (now with prefixes and deterministic order of notes)
yarikoptic Mar 13, 2026
bff037c
rename original models into models_orig
yarikoptic Mar 13, 2026
6bb4b52
Adding models.py back to import from converted and some symbols from …
yarikoptic Mar 13, 2026
725e957
Expand comment for linkml-auto-converted hatch env with usage instruc…
candleindark Mar 16, 2026
a2324fa
fix: correct `default_prefix` to `dandi`
candleindark Mar 16, 2026
21fa682
fix: use portable ERE sed pattern for normalizing memory addresses in…
candleindark Mar 17, 2026
7ab9964
'Merged' with linkml-conversion 0.12.1-55-g76a9d77 and 2 branches
yarikoptic Mar 20, 2026
78d6899
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 20, 2026
3938e26
'Merged' with linkml-conversion 0.12.1-57-ge2d124c and 2 branches
yarikoptic Mar 20, 2026
4e95f1e
'Merged' with linkml-conversion 0.12.1-59-gc0fbd02 and 2 branches
candleindark Mar 26, 2026
991790f
'Merged' with linkml-conversion 0.12.1-59-gc0fbd02 and 2 branches
candleindark Mar 31, 2026
b4177a5
'Merged' with linkml-conversion 0.12.1-61-gb92119c and 2 branches
candleindark Apr 1, 2026
634bad6
'Merged' with linkml-conversion 0.12.1-62-g043c3d6 and 2 branches
candleindark Apr 1, 2026
51ae748
'Merged' with linkml-conversion 0.12.1-63-g9209976 and 2 branches
candleindark Apr 1, 2026
719c321
'Merged' with linkml-conversion 0.12.1-65-ge404946 and 2 branches
candleindark Apr 7, 2026
1ba94fc
'Merged' with linkml-conversion 0.12.1-67-g7dd492d and 2 branches
candleindark Apr 7, 2026
4bdbfa6
'Merged' with linkml-conversion 0.12.1-69-g0a21040 and 2 branches
candleindark Apr 7, 2026
b1da732
'Merged' with linkml-conversion 0.12.1-69-g0a21040 and 2 branches
candleindark Apr 8, 2026
06fcc9c
'Merged' with linkml-conversion 0.12.1-69-g0a21040 and 2 branches
candleindark Apr 10, 2026
a5f2818
'Merged' with linkml-conversion 0.12.1-70-gaeae21f and 2 branches
candleindark Apr 13, 2026
78ec4ff
'Merged' with linkml-conversion 0.12.1-70-gaeae21f and 2 branches
candleindark Apr 14, 2026
bc36198
'Merged' with linkml-conversion 0.12.1-71-g2c38801 and 2 branches
candleindark Apr 15, 2026
68b5b82
'Merged' with linkml-conversion 0.12.1-72-g7773f75 and 2 branches
candleindark Apr 16, 2026
70b9ada
'Merged' with linkml-conversion 0.12.1-78-g33dd458 and 2 branches
candleindark Apr 21, 2026
da45f9b
'Merged' with linkml-conversion 0.12.1-79-g982491a and 2 branches
candleindark Apr 21, 2026
5408582
'Merged' with linkml-conversion 0.12.1-80-g4ec6cda and 2 branches
candleindark Apr 21, 2026
0e2df32
'Merged' with linkml-conversion 0.12.1-93-g08e2d11 and 2 branches
candleindark May 7, 2026
b3b317c
'Merged' with linkml-conversion 0.12.1-93-g08e2d11 and 2 branches
candleindark May 11, 2026
18bfd76
'Merged' with linkml-conversion 0.12.1-95-ga0cdc4a and 2 branches
candleindark May 14, 2026
97c7a27
'Merged' with linkml-conversion 0.12.1-116-gc931794 and 2 branches
candleindark May 18, 2026
e66b24b
'Merged' with linkml-conversion 0.12.1-116-gc931794 and 2 branches
candleindark May 19, 2026
35b43e2
'Merged' with linkml-conversion 0.12.1-116-gc931794 and 2 branches
candleindark May 20, 2026
140ffba
'Merged' with linkml-conversion 0.12.1-116-gc931794 and 2 branches
candleindark May 27, 2026
17d87af
'Merged' with linkml-conversion 0.12.1-116-gc931794 and 2 branches
candleindark May 27, 2026
fdc5abf
'Merged' with linkml-conversion 0.12.1-119-g43e4426 and 2 branches
candleindark May 29, 2026
7e3efb3
'Merged' with linkml-conversion 0.12.1-128-g30b02b03 and 2 branches
candleindark Jun 1, 2026
bb8e50c
'Merged' with linkml-conversion 0.12.1-129-g041a280b and 2 branches
candleindark Jun 1, 2026
021d0ff
'Merged' with linkml-conversion 0.12.1-132-g4e77ee55 and 2 branches
candleindark Jul 20, 2026
f1079e9
'Merged' with linkml-conversion 0.12.1-132-g4e77ee55 and 2 branches
candleindark Jul 24, 2026
a03e2bc
'Merged' with linkml-conversion 0.12.1-133-g373aa1c1 and 2 branches
candleindark Jul 24, 2026
c17f4b5
'Merged' with linkml-conversion 0.12.1-168-gc3b2e1dc and 2 branches
candleindark Aug 3, 2026
ffd820e
'Merged' with linkml-conversion 0.12.1-169-g0eba7a14 and 2 branches
candleindark Aug 3, 2026
e2cadb7
'Merged' with linkml-conversion 0.14.0-91-g35f049ac and 2 branches
candleindark Aug 7, 2026
0ce51b3
'Merged' with linkml-conversion 0.14.0-94-g54138ad3 and 2 branches
candleindark Aug 7, 2026
0db364f
'Merged' with linkml-conversion 0.14.0-95-gbedd2975 and 2 branches
candleindark Aug 7, 2026
30d9a85
'Merged' with linkml-conversion 0.14.0-96-g36393de6 and 2 branches
candleindark Aug 9, 2026
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2,093 changes: 16 additions & 2,077 deletions dandischema/models.py
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1,468 changes: 1,468 additions & 0 deletions dandischema/models.yaml
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21 changes: 0 additions & 21 deletions dandischema/models_importstab.py
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