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CHANGELOG.md

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Changelog

0.6.1 (2025-11-06)

Bug Fixes

0.6.0 (2025-08-20)

Features

  • support for multi-gpu inference and OOM datasets (#53) (1d0012c)

0.5.0 (2025-08-11)

Features

  • added ESM-2 preprocessing pipeline (#49) (181193c)

0.4.2 (2025-07-24)

Bug Fixes

  • update model overview figure (#48) (047a0ea)
  • updated model overview figure (6b5be7d)

0.4.1 (2025-07-08)

Bug Fixes

  • ood species cge generation bug; number of duplicate genes bug (#42) (89953a1)

0.4.0 (2025-06-24)

Features

  • bulk download script for cxg discover (#38) (2a65600)

Bug Fixes

0.3.0 (2025-05-29)

Features

  • CGE inference support and ESM2-CE model (Resolves #28) (#34) (35be080)

0.2.1 (2025-05-08)

Bug Fixes

0.2.0 (2025-05-06)

Features

0.1.1 (2025-05-02)

Bug Fixes

0.1.0 (2025-04-28)

Features

  • add open source documentation and release workflows (#2) (99f7580)

Bug Fixes

  • fixes broken transcriptformer import (#5) (b7e840f)
  • uncomment PyPi release code (#7) Release-As: 0.1.0 (5038680)