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Fix color_mask construction for large num. colors #8

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Fix color_mask construction for large num. colors #8

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54ae552
Fix color_mask construction for large num. colors
rob-p May 19, 2017
3c303e6
Merge pull request #2 from COMBINE-lab/color-mask-patch-1-1
rob-p May 19, 2017
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5 changes: 3 additions & 2 deletions cosmo-color.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -134,8 +134,9 @@ void find_bubbles(const debruijn_graph_shifted<> &dbg, sd_vector<> &colors, colo
branch_labels[branch_num] += base[x];
// build color mask
color_bv color_mask = 0;
for (int c = 0; c < num_colors; c++)
color_mask |= colors[edge * num_colors + c] << c;
for (int c = 0; c < num_colors; c++) {
color_mask.set(c, colors[edge*num_colors+c]);
}
branch_color[branch_num] = color_mask;

// walk along edges until we encounter
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