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@codeflash-ai codeflash-ai bot commented Nov 12, 2025

📄 16% (0.16x) speedup for _handle_sublists in src/bokeh/plotting/graph.py

⏱️ Runtime : 824 microseconds 707 microseconds (best of 250 runs)

📝 Explanation and details

The optimization replaces two separate generator expressions (any() and all()) with explicit for loops that provide better short-circuiting behavior and avoid multiple iterations over the input values.

Key optimizations:

  1. Single-pass detection: Instead of using any(isinstance(x, (list, tuple)) for x in values) which iterates through all values, the optimized version uses a manual loop that breaks immediately upon finding the first non-scalar element, setting has_non_scalar = True.

  2. Early exit validation: The validation loop that checks for mixed types also exits immediately when finding the first invalid element, rather than checking all elements via all().

  3. Reduced iterations: The original code potentially iterates through values three times (once for any(), once for all(), once for the list comprehension), while the optimized version only iterates twice maximum.

Performance impact:

  • Scalar-only cases see the biggest gains (60-90% faster) because the optimization immediately identifies no non-scalars exist after checking just the first few elements
  • Large datasets benefit from avoiding redundant iterations, showing 11-22% speedup on 1000-element lists
  • Error cases (mixed types) are 45-75% faster due to early exit when detecting the first type mismatch

Context relevance:
The function is called within from_networkx() which processes NetworkX graph node and edge attributes. This is likely in a hot path when converting large graphs, making the 16% overall speedup meaningful for graph visualization workflows. The optimization particularly benefits scenarios with many scalar attributes (common in graph data) while maintaining identical error handling and output behavior.

Correctness verification report:

Test Status
⚙️ Existing Unit Tests 🔘 None Found
🌀 Generated Regression Tests 64 Passed
⏪ Replay Tests 🔘 None Found
🔎 Concolic Coverage Tests 🔘 None Found
📊 Tests Coverage 100.0%
🌀 Generated Regression Tests and Runtime
import pytest  # used for our unit tests
from bokeh.plotting.graph import _handle_sublists

# unit tests

# --- Basic Test Cases ---

def test_all_scalars_int():
    # All elements are scalars (ints)
    values = [1, 2, 3]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 1.46μs -> 884ns (64.9% faster)

def test_all_scalars_str():
    # All elements are scalars (str)
    values = ["a", "b", "c"]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 1.28μs -> 762ns (68.2% faster)

def test_all_lists():
    # All elements are lists
    values = [[1, 2], [3, 4], [5]]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 2.59μs -> 1.68μs (54.5% faster)

def test_all_tuples():
    # All elements are tuples
    values = [(1, 2), (3,), (4, 5)]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 2.58μs -> 1.80μs (43.0% faster)

def test_lists_and_none():
    # Lists and None values
    values = [[1], None, [2, 3]]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 2.35μs -> 1.56μs (50.7% faster)

def test_tuples_and_none():
    # Tuples and None values
    values = [(1,), None, (2, 3)]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 2.63μs -> 1.73μs (52.2% faster)

def test_mixed_lists_and_tuples():
    # Mix of lists and tuples
    values = [(1, 2), [3, 4], (5,)]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 2.67μs -> 1.82μs (46.4% faster)

# --- Edge Test Cases ---

def test_empty_list():
    # Empty input list
    values = []
    codeflash_output = _handle_sublists(values); result = codeflash_output # 811ns -> 386ns (110% faster)

def test_all_none():
    # All elements are None
    values = [None, None]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 1.25μs -> 725ns (72.7% faster)

def test_mixed_scalars_and_list_raises():
    # Mix of scalars and lists should raise ValueError
    values = [1, [2, 3], 4]
    with pytest.raises(ValueError):
        _handle_sublists(values) # 2.30μs -> 1.42μs (62.6% faster)

def test_mixed_scalars_and_tuple_raises():
    # Mix of scalars and tuples should raise ValueError
    values = [1, (2, 3), 4]
    with pytest.raises(ValueError):
        _handle_sublists(values) # 2.40μs -> 1.49μs (61.2% faster)

def test_mixed_list_tuple_and_none():
    # Mix of lists, tuples, and None
    values = [[], (1,), None]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 2.67μs -> 1.81μs (47.7% faster)

def test_nested_lists():
    # Nested lists (should treat outer list only)
    values = [[1, [2, 3]], [4]]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 2.17μs -> 1.41μs (54.4% faster)

def test_single_scalar():
    # Single scalar value in a list
    values = [42]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 1.07μs -> 630ns (70.3% faster)

def test_single_list():
    # Single list value in a list
    values = [[1, 2, 3]]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 2.04μs -> 1.27μs (61.0% faster)

def test_single_tuple():
    # Single tuple value in a list
    values = [(1, 2)]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 2.24μs -> 1.47μs (52.5% faster)

def test_list_with_empty_list_and_none():
    # List with empty list and None
    values = [[], None, []]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 2.30μs -> 1.51μs (51.8% faster)

def test_list_with_none_and_scalar():
    # List with None and scalar (should not convert None)
    values = [None, 1, None]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 1.30μs -> 811ns (60.2% faster)

def test_list_with_none_and_tuple_and_scalar_raises():
    # List with None, tuple, and scalar (should raise)
    values = [None, (1,), 2]
    with pytest.raises(ValueError):
        _handle_sublists(values) # 2.60μs -> 1.62μs (60.8% faster)

def test_list_with_bool_and_list_raises():
    # List with bool and list (should raise)
    values = [True, [1, 2], False]
    with pytest.raises(ValueError):
        _handle_sublists(values) # 2.48μs -> 1.43μs (73.7% faster)

def test_list_with_float_and_tuple_raises():
    # List with float and tuple (should raise)
    values = [1.5, (2, 3), 2.5]
    with pytest.raises(ValueError):
        _handle_sublists(values) # 2.26μs -> 1.45μs (55.6% faster)

def test_list_with_dict_and_list_raises():
    # List with dict and list (should raise)
    values = [{"a": 1}, [1, 2], {"b": 2}]
    with pytest.raises(ValueError):
        _handle_sublists(values) # 2.08μs -> 1.43μs (45.3% faster)

def test_list_with_set_and_tuple_raises():
    # List with set and tuple (should raise)
    values = [{1, 2}, (3, 4), {5}]
    with pytest.raises(ValueError):
        _handle_sublists(values) # 2.56μs -> 1.58μs (62.5% faster)

def test_list_with_custom_object_and_list_raises():
    # List with custom object and list (should raise)
    class Foo:
        pass
    values = [Foo(), [1, 2], Foo()]
    with pytest.raises(ValueError):
        _handle_sublists(values) # 2.40μs -> 1.62μs (48.0% faster)

# --- Large Scale Test Cases ---

def test_large_all_scalars():
    # Large list of scalars
    values = list(range(1000))
    codeflash_output = _handle_sublists(values); result = codeflash_output # 56.7μs -> 46.5μs (21.8% faster)

def test_large_all_lists():
    # Large list of lists
    values = [[i, i+1] for i in range(1000)]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 79.7μs -> 71.3μs (11.8% faster)

def test_large_all_tuples():
    # Large list of tuples
    values = [(i, i+1) for i in range(1000)]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 88.7μs -> 78.9μs (12.4% faster)

def test_large_lists_and_none():
    # Large list of lists and None
    values = [[i] if i % 2 == 0 else None for i in range(1000)]
    expected = [[i] if i % 2 == 0 else [] for i in range(1000)]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 58.3μs -> 54.6μs (6.91% faster)

def test_large_mixed_scalars_and_lists_raises():
    # Large list with mix of scalars and lists, should raise
    values = [i if i % 2 == 0 else [i] for i in range(1000)]
    with pytest.raises(ValueError):
        _handle_sublists(values) # 2.37μs -> 1.49μs (59.0% faster)

def test_large_mixed_scalars_and_tuples_raises():
    # Large list with mix of scalars and tuples, should raise
    values = [i if i % 2 == 0 else (i,) for i in range(1000)]
    with pytest.raises(ValueError):
        _handle_sublists(values) # 2.50μs -> 1.61μs (55.5% faster)

def test_large_lists_and_tuples_and_none():
    # Large list with lists, tuples, and None
    values = [[i] if i % 3 == 0 else (i,) if i % 3 == 1 else None for i in range(1000)]
    expected = [[i] if i % 3 == 0 else [i] if i % 3 == 1 else [] for i in range(1000)]
    codeflash_output = _handle_sublists(values); result = codeflash_output # 70.5μs -> 65.8μs (7.17% faster)

def test_large_all_none():
    # Large list of None
    values = [None] * 1000
    codeflash_output = _handle_sublists(values); result = codeflash_output # 55.9μs -> 46.2μs (21.1% faster)
# codeflash_output is used to check that the output of the original code is the same as that of the optimized code.
import pytest
from bokeh.plotting.graph import _handle_sublists

# unit tests

# ------------------------
# Basic Test Cases
# ------------------------

def test_all_scalars_ints():
    # All elements are scalars (ints)
    codeflash_output = _handle_sublists([1, 2, 3]) # 1.28μs -> 748ns (71.5% faster)

def test_all_scalars_floats():
    # All elements are scalars (floats)
    codeflash_output = _handle_sublists([1.1, 2.2, 3.3]) # 1.23μs -> 745ns (65.4% faster)

def test_all_scalars_strings():
    # All elements are scalars (strings)
    codeflash_output = _handle_sublists(['a', 'b', 'c']) # 1.26μs -> 725ns (73.5% faster)

def test_all_lists():
    # All elements are lists
    codeflash_output = _handle_sublists([[1], [2, 3], [4]]) # 2.61μs -> 1.67μs (56.3% faster)

def test_all_tuples():
    # All elements are tuples
    codeflash_output = _handle_sublists([(1,), (2, 3), (4,)]) # 2.56μs -> 1.83μs (39.8% faster)

def test_all_lists_and_tuples():
    # All elements are lists or tuples
    codeflash_output = _handle_sublists([[1], (2, 3), [4, 5]]) # 2.54μs -> 1.72μs (47.6% faster)

def test_lists_with_none():
    # Some elements are None, should be replaced with []
    codeflash_output = _handle_sublists([[1], None, (2, 3)]) # 2.41μs -> 1.65μs (46.4% faster)

def test_all_nones():
    # All elements are None and at least one is a (list, tuple)
    codeflash_output = _handle_sublists([None, None, None]) # 1.31μs -> 748ns (75.0% faster)

# ------------------------
# Edge Test Cases
# ------------------------

def test_empty_list():
    # Input is an empty list
    codeflash_output = _handle_sublists([]) # 770ns -> 389ns (97.9% faster)

def test_mixed_scalar_and_list():
    # Mixing scalars and lists should raise ValueError
    with pytest.raises(ValueError):
        _handle_sublists([1, [2, 3], 4]) # 2.27μs -> 1.42μs (60.0% faster)

def test_mixed_scalar_and_tuple():
    # Mixing scalars and tuples should raise ValueError
    with pytest.raises(ValueError):
        _handle_sublists(['a', (2, 3), 'b']) # 2.37μs -> 1.46μs (62.2% faster)

def test_mixed_scalar_and_list_with_none():
    # Mixing scalars, lists, and None should raise ValueError
    with pytest.raises(ValueError):
        _handle_sublists([1, [2, 3], None]) # 2.14μs -> 1.29μs (65.9% faster)

def test_all_none_with_list():
    # All elements are None, but at least one is a list
    codeflash_output = _handle_sublists([None, [], None]) # 2.46μs -> 1.68μs (46.3% faster)

def test_nested_lists():
    # Nested lists should be treated as non-scalars, but not flattened
    codeflash_output = _handle_sublists([[[1]], [[2, 3]], [[4]]]) # 2.28μs -> 1.55μs (46.7% faster)

def test_single_element_list():
    # Single element that is a list
    codeflash_output = _handle_sublists([[1, 2, 3]]) # 1.93μs -> 1.26μs (52.8% faster)

def test_single_element_scalar():
    # Single element that is a scalar
    codeflash_output = _handle_sublists([42]) # 1.08μs -> 574ns (87.8% faster)

def test_single_element_none():
    # Single element that is None
    codeflash_output = _handle_sublists([None]) # 1.05μs -> 583ns (81.0% faster)

def test_list_with_all_empty_lists():
    # All elements are empty lists
    codeflash_output = _handle_sublists([[], [], []]) # 2.41μs -> 1.53μs (57.6% faster)

def test_list_with_empty_and_nonempty_lists():
    # Mix of empty and non-empty lists
    codeflash_output = _handle_sublists([[], [1], [2, 3]]) # 2.33μs -> 1.50μs (56.2% faster)

def test_list_with_tuple_and_none():
    # Mix of tuple and None
    codeflash_output = _handle_sublists([(1, 2), None, (3,)]) # 2.52μs -> 1.74μs (44.8% faster)

def test_list_with_list_and_none():
    # Mix of list and None
    codeflash_output = _handle_sublists([[1, 2], None, [3]]) # 2.18μs -> 1.46μs (49.6% faster)

def test_list_with_tuple_and_list():
    # Mix of tuple and list
    codeflash_output = _handle_sublists([(1, 2), [3, 4]]) # 2.55μs -> 1.69μs (50.8% faster)

def test_list_with_tuple_list_and_none():
    # Mix of tuple, list, and None
    codeflash_output = _handle_sublists([(1, 2), [3, 4], None]) # 2.58μs -> 1.78μs (45.5% faster)

def test_list_with_nonetype_and_scalar():
    # Mix of None and scalar, should not convert None
    codeflash_output = _handle_sublists([None, 1, None]) # 1.29μs -> 773ns (66.9% faster)

def test_list_with_nonetype_and_tuple():
    # Mix of None and tuple, should convert None to []
    codeflash_output = _handle_sublists([None, (1, 2), None]) # 2.73μs -> 1.75μs (56.3% faster)

def test_list_with_bool_and_list():
    # Mixing bool (scalar) and list should raise ValueError
    with pytest.raises(ValueError):
        _handle_sublists([True, [1, 2]]) # 2.58μs -> 1.50μs (71.6% faster)

def test_list_with_dict_and_list():
    # Mixing dict (scalar for this context) and list should raise ValueError
    with pytest.raises(ValueError):
        _handle_sublists([{'a': 1}, [1, 2]]) # 2.15μs -> 1.53μs (41.0% faster)

# ------------------------
# Large Scale Test Cases
# ------------------------

def test_large_all_scalars():
    # Large list of scalars
    data = list(range(1000))
    codeflash_output = _handle_sublists(data) # 56.6μs -> 46.2μs (22.5% faster)

def test_large_all_lists():
    # Large list of lists
    data = [[i, i+1] for i in range(1000)]
    expected = [[i, i+1] for i in range(1000)]
    codeflash_output = _handle_sublists(data) # 98.6μs -> 90.5μs (8.94% faster)

def test_large_all_tuples():
    # Large list of tuples
    data = [(i, i+1) for i in range(1000)]
    expected = [[i, i+1] for i in range(1000)]
    codeflash_output = _handle_sublists(data) # 88.6μs -> 79.7μs (11.1% faster)

def test_large_lists_with_nones():
    # Large list with lists and None
    data = [[i, i+1] if i % 2 == 0 else None for i in range(1000)]
    expected = [[i, i+1] if i % 2 == 0 else [] for i in range(1000)]
    codeflash_output = _handle_sublists(data) # 57.4μs -> 55.5μs (3.34% faster)

def test_large_mixed_scalars_and_lists_raises():
    # Large list mixing scalars and lists should raise ValueError
    data = [i if i % 2 == 0 else [i, i+1] for i in range(1000)]
    with pytest.raises(ValueError):
        _handle_sublists(data) # 2.40μs -> 1.49μs (61.2% faster)
# codeflash_output is used to check that the output of the original code is the same as that of the optimized code.

To edit these changes git checkout codeflash/optimize-_handle_sublists-mhwcs44t and push.

Codeflash Static Badge

The optimization replaces two separate generator expressions (`any()` and `all()`) with explicit `for` loops that provide better short-circuiting behavior and avoid multiple iterations over the input `values`.

**Key optimizations:**

1. **Single-pass detection**: Instead of using `any(isinstance(x, (list, tuple)) for x in values)` which iterates through all values, the optimized version uses a manual loop that breaks immediately upon finding the first non-scalar element, setting `has_non_scalar = True`.

2. **Early exit validation**: The validation loop that checks for mixed types also exits immediately when finding the first invalid element, rather than checking all elements via `all()`.

3. **Reduced iterations**: The original code potentially iterates through `values` three times (once for `any()`, once for `all()`, once for the list comprehension), while the optimized version only iterates twice maximum.

**Performance impact:**
- **Scalar-only cases** see the biggest gains (60-90% faster) because the optimization immediately identifies no non-scalars exist after checking just the first few elements
- **Large datasets** benefit from avoiding redundant iterations, showing 11-22% speedup on 1000-element lists
- **Error cases** (mixed types) are 45-75% faster due to early exit when detecting the first type mismatch

**Context relevance:**
The function is called within `from_networkx()` which processes NetworkX graph node and edge attributes. This is likely in a hot path when converting large graphs, making the 16% overall speedup meaningful for graph visualization workflows. The optimization particularly benefits scenarios with many scalar attributes (common in graph data) while maintaining identical error handling and output behavior.
@codeflash-ai codeflash-ai bot requested a review from mashraf-222 November 12, 2025 18:48
@codeflash-ai codeflash-ai bot added ⚡️ codeflash Optimization PR opened by Codeflash AI 🎯 Quality: High Optimization Quality according to Codeflash labels Nov 12, 2025
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