feat: add debug flag to skip checksum validation of database #150
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Hi @chklovski,
Following up on my suggestion here: #140
This PR adds an optional command-line flag (
dbg_skip_checksum) to skip checksum validation of the CheckM2 database. This will allow us to use a curated, reduced version of the database for unit testing CheckM2 in CI tests for our pipeline, as running CheckM2 with the full database can be very slow (and also needs to be downloaded each time in a CI run).Let me know what you think, and hopefully we can add this PR (or a similar one). This is a real blocker for quick pipeline validation on our end!