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101 Open 186 Closed
101 Open 186 Closed
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Issues list

return gene context info for genomic queries enhancement New feature or request priority:medium Medium priority
#551 opened Mar 27, 2024 by katiestahl
@korikuzma
8
pytest-asyncio DeprecationWarning for event_loop priority:low Low priority test Changes to test code only
#534 opened Feb 8, 2024 by korikuzma
Reduce the number of tests priority:low Low priority test Changes to test code only
#527 opened Jan 10, 2024 by korikuzma
Use biocommons.hgvs for parsing HGVS expressions build Changes that affect the build system or dependencies priority:medium Medium priority technical debt A feature/requirement implemented in a sub-optimal way & must be re-written. Contrast to "cleanup"
#526 opened Dec 11, 2023 by korikuzma
Consider lazy loading for class attributes priority:low Low priority technical debt A feature/requirement implemented in a sub-optimal way & must be re-written. Contrast to "cleanup"
#522 opened Nov 7, 2023 by korikuzma
Expose cool-seq-tool get_grch38_mane_gene_cds_overlap endpoint enhancement New feature or request priority:high High priority
#521 opened Nov 7, 2023 by korikuzma
2 tasks
@korikuzma
Add basic API endpoint tests priority:medium Medium priority test Changes to test code only
#519 opened Oct 26, 2023 by korikuzma
If genomic query fails getting liftover/mane, try using original input to return a response enhancement New feature or request priority:medium Medium priority
#506 opened Sep 1, 2023 by korikuzma
1
Stabilize construction of required resources priority:low Low priority technical debt A feature/requirement implemented in a sub-optimal way & must be re-written. Contrast to "cleanup"
#499 opened Aug 22, 2023 by jsstevenson
Add support for SPDI nomenclature in /to_vrs and /normalize enhancement New feature or request
#497 opened Aug 22, 2023 by korikuzma
Fix GH Action installing deps ci/cd Continuous integration and continuous delivery/deployment changes priority:low Low priority
#495 opened Aug 21, 2023 by korikuzma
Considering adding vulture pre-commit hook build Changes that affect the build system or dependencies priority:low Low priority
#493 opened Aug 21, 2023 by korikuzma
1
Adding input assembly for gnomad vcf queries bug Something isn't working vrs-2-alpha Changes are needed for the `staging` branch which points to VRS 2.0-alpha
#490 opened Aug 10, 2023 by korikuzma
@korikuzma
2
Parameterize vrs_ref_allele_seq enhancement New feature or request
#481 opened Aug 8, 2023 by korikuzma
@korikuzma
Improve free text query performance performance Changes that are for performance improvements only. priority:high High priority
#477 opened Jul 31, 2023 by korikuzma
@korikuzma
1
No gene symbol found for ENST00000277541.6 bug Something isn't working priority:low Low priority
#473 opened Jul 24, 2023 by korikuzma
Add more tests for HGVS Ensembl expressions priority:low Low priority test Changes to test code only
#471 opened Jul 20, 2023 by korikuzma
Better error and warning handling priority:medium Medium priority technical debt A feature/requirement implemented in a sub-optimal way & must be re-written. Contrast to "cleanup"
#467 opened Jul 18, 2023 by korikuzma
1
Add FAQ Docs documentation Improvements or additions to documentation
#466 opened Jul 14, 2023 by korikuzma
Parsed to CNV endpoints do not cover all ambiguous ranges bug Something isn't working priority:low Low priority
#465 opened Jul 13, 2023 by korikuzma
Add support for NG expressions enhancement New feature or request priority:low Low priority
#464 opened Jul 13, 2023 by korikuzma
Support NCBI36 / hg18 enhancement New feature or request priority:medium Medium priority
#463 opened Jul 12, 2023 by korikuzma
@korikuzma
hgvs_to_copy_number_count should support 0 baseline_copies
#457 opened Jun 28, 2023 by theferrit32
1
parsed to copy number endpoints should allow curie or gene as subject enhancement New feature or request priority:low Low priority
#451 opened Jun 21, 2023 by korikuzma
to_vrs returns valid results when hgvs position is greater than ref sequence length bug Something isn't working
#449 opened Jun 19, 2023 by larrybabb
2
ProTip! What’s not been updated in a month: updated:<2024-08-21.