Skip to content

Commit

Permalink
feat: Update GeneFinder.jl to version 0.5.0
Browse files Browse the repository at this point in the history
- Update `ORF` type to handle new `finder` argument type
- Add `finder` argument to `findorfs` method for gene finding method selection
- Remove `getorf` method in favor of `sequence` method for `ORF` instances
- Update `write_*` API to handle new `finder` argument
- Implement `NaiveFinder` method with scoring scheme directly
- Update `iscoding` to handle new `finder` argument
- Update and improve documentation
  • Loading branch information
camilogarciabotero committed Jul 3, 2024
1 parent fe3c212 commit 9e692bf
Showing 1 changed file with 12 additions and 1 deletion.
13 changes: 12 additions & 1 deletion CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,18 @@ All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog and this project adheres to Semantic Versioning.

## [UNRELEASED](https://github.com/camilogarciabotero/GeneFinder.jl/compare/v0.4.0...main)
## [UNRELEASED](https://github.com/camilogarciabotero/GeneFinder.jl/compare/v0.5.0...main)

## [0.5.0]

- The `ORF` type has been updated to handle the new `finder` argument type.
- `findorfs` now has a new `finder` argument that can be used to select the gene finding method.
- The `getorf` method has been removed in favor of having a simple `sequence` method for `ORF` instances.
- The `write_*` API has been updated to handle the new `finder` argument.
- A `NaiveFinder` method has been implemented with a scoring scheme directly.
- `iscoding` has been updated to handle the new `finder` argument.
- Documentation has been updated and improved.


## [0.4.0]

Expand Down

0 comments on commit 9e692bf

Please sign in to comment.