Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Update News Release - fix formatting #10509

Merged
merged 2 commits into from
Dec 29, 2023
Merged

Update News Release - fix formatting #10509

Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
1dbc5d5
fix formatting
rmadupuri Dec 29, 2023
436ca64
Merge branch 'master' into Dec-12-2023-news-release
rmadupuri Dec 29, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
10 changes: 5 additions & 5 deletions docs/News.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
## Dec 29, 2023
* **Added data** consisting of 5,120 samples from 13 studies:
* [Endometrial Cancer (MSK, Cancer Discovery 2023)](https://www.cbioportal.org/study/summary?id=ucec_ancestry_cds_msk_2023) *1882 samples*
* [Endometrial Cancer (MSK, Cancer Discovery 2023)](https://www.cbioportal.org/study/summary?id=ucec_ancestry_cds_msk_2023) *1882 samples*
* [Esophagogastric Cancer (MSK, J Natl Cancer Inst 2023)](https://www.cbioportal.org/study/summary?id=egc_msk_2023) *902 samples*
* [Diffuse Glioma (GLASS Consortium, 2022)](https://www.cbioportal.org/study/summary?id=difg_glass) *693 samples*
* [Bladder Cancer (MSK, Clin Cancer Res 2023)](https://www.cbioportal.org/study/summary?id=bladder_msk_2023) *526 samples*
Expand All @@ -14,23 +14,23 @@
* [Rhabdomyosarcomas (MSK, NPJ Precis Oncol 2023)](https://www.cbioportal.org/study/summary?id=soft_tissue_msk_2023) *42 samples*
* [Pediatric Rhabdomyosarcomas (MSK, JCO Precis Oncol 2023)](https://www.cbioportal.org/study/summary?id=rms_msk_2023) *24 samples*

* **Gene Tables Update** Updated tables of genes (main and alias), based on [Oct 1, 2023 HGNC release](http://ftp.ebi.ac.uk/pub/databases/genenames/hgnc/archive/monthly/tsv/). See seedDB release notes [here](https://github.com/cBioPortal/datahub/tree/master/seedDB#latest-seed-database-schema-2131) for details.
* **Gene Tables Update:** Updated tables of genes (main and alias), based on [Oct 1, 2023 HGNC release](http://ftp.ebi.ac.uk/pub/databases/genenames/hgnc/archive/monthly/tsv/). See seedDB release notes [here](https://github.com/cBioPortal/datahub/tree/master/seedDB#latest-seed-database-schema-2131) for details.

## Aug 21, 2023
* **Added data** consisting of 4,488 samples from 7 studies:
* [Lung Adenocarcinoma Met Organotropism (MSK, Cancer Cell 2023)](https://www.cbioportal.org/study/summary?id=luad_mskcc_2023_met_organotropism) *2653 samples*
* [Lung Adenocarcinoma Met Organotropism (MSK, Cancer Cell 2023)](https://www.cbioportal.org/study/summary?id=luad_mskcc_2023_met_organotropism) *2653 samples*
* [Acute Myeloid Leukemia (OHSU, Cancer Cell 2022)](https://www.cbioportal.org/study/summary?id=aml_ohsu_2022) *942 samples*
* [Colon Cancer (Sidra-LUMC AC-ICAM, Nat Med 2023)](https://www.cbioportal.org/study/summary?id=coad_silu_2022) *348 samples*
* [Pediatric Neuroblastoma (MSK, Nat Genet 2023)](https://www.cbioportal.org/study/summary?id=nbl_msk_2023) *223 samples*
* [Colorectal Adenocarcinoma (MSK, Nat Commun 2022)](https://www.cbioportal.org/study/summary?id=bowel_colitis_msk_2022) *180 samples*
* [Bladder Cancer (Columbia University/MSK, Cell 2018)](https://www.cbioportal.org/study/summary?id=bladder_columbia_msk_2018) *130 samples*
* [Myoepithelial Carcinomas of Soft Tissue (WCM, CSH Molecular Case Studies 2022)](https://www.cbioportal.org/study/summary?id=stmyec_wcm_2022) *12 samples*

* **Gene Tables Update** Updated tables of genes (main and alias), based on [Apr 1, 2023 HGNC release](http://ftp.ebi.ac.uk/pub/databases/genenames/hgnc/archive/monthly/tsv/). See seedDB release notes [here](https://github.com/cBioPortal/datahub/tree/master/seedDB#latest-seed-database) for details.
* **Gene Tables Update:** Updated tables of genes (main and alias), based on [Apr 1, 2023 HGNC release](http://ftp.ebi.ac.uk/pub/databases/genenames/hgnc/archive/monthly/tsv/). See seedDB release notes [here](https://github.com/cBioPortal/datahub/tree/master/seedDB#latest-seed-database) for details.

## Aug 1, 2023
* **Enhancement**: One-sided Fisher's exact tests were changed to be two-sided. The affected pages are:
* Results View Page - Mutual Exclusivity Tab
* Results View Page - Mutual Exclusivity Tab
* Results View Page - Comparison Tab - Genomic Alterations Tab
* Comparison Page - Genomic Alterations Tab
* Comparison Page - Mutations Tab
Expand Down
Loading