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Bring in some performance improvements from genomicsdb #5036

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Bring in some performance improvements from genomicsdb

Bring in some performance improvements from genomicsdb #5036

Triggered via pull request January 31, 2025 19:26
@nalinigansnalinigans
synchronize #9059
genomicsdb_perf
Status Success
Total duration 44m 54s
Artifacts 8

gatk-tests.yml

on: pull_request
check if the environment has privileges
0s
check if the environment has privileges
build and push gatk docker to artifacts
11m 53s
build and push gatk docker to artifacts
Validate script WDLs using womtools
45s
Validate script WDLs using womtools
Validate generated WDLs using womtools
14m 23s
Validate generated WDLs using womtools
Matrix: wdlTests
Matrix: test
Matrix: testOnDocker
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Annotations

7 errors
Java 17.0.6+10 build and test cloud
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
Java 17.0.6+10 build and test unit
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
Java 17.0.6+10 build and test integration
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
Java 17.0.6+10 test on docker unit
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
Java 17.0.6+10 test on docker conda
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
Java 17.0.6+10 test on docker variantcalling
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
Java 17.0.6+10 test on docker integration
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth

Artifacts

Produced during runtime
Name Size Digest
gatkDockerImage Expired
2.2 GB
sha256:537541913ca32f362f0c71285ffc25943eac66bb456e1a955f6a35366175c77b
test-results-17.0.6+10-cloud Expired
82.1 KB
sha256:a0957412e5b3c6492acfaddcc1b292f141d03255aeab947504a5c6781e13b5d9
test-results-17.0.6+10-integration Expired
575 KB
sha256:420f5dfd48eeecdf72bd9057fd49b2e76a0ea57a234e59dd627dd298f49272fa
test-results-17.0.6+10-unit Expired
5.59 MB
sha256:27601f0258c831d92a04ea9aa1839783dcb8e3e68411cab8439f4ea155209402
test-results-docker-17.0.6+10-conda Expired
53.1 KB
sha256:e9cdf780695ac99882138ca106d72412d17c1f9a0c837efbed388fb65a1cc702
test-results-docker-17.0.6+10-integration Expired
577 KB
sha256:a1aadcfb7ff8479a7b9502e7f87a7ec9701de041b6d67e3c9e32763d5138278c
test-results-docker-17.0.6+10-unit Expired
5.41 MB
sha256:2c714981fe7ccd77b6551bae7e94b5b48e97df00446063c8ba43e03bd0781e88
test-results-docker-17.0.6+10-variantcalling Expired
31.8 KB
sha256:8d814126e4f92e55709d614088ed8533dc4e1015f1e66d82d9892787e2ae8d0f