Add option to use hard links instead of copying outputs. #6672
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The CopyWorkflowActor regularly gets timeouts when trying to copy the gigabytes of data that are typically associated with production workflows. Also this duplicates the amount of disk space used for a workflow.
This remedies that problem by hardlinking the files. It is much much faster, and the cromwell-executions folder can be safely removed afterward.
This is very beneficial for people who run cromwell on a cluster backend in
run
mode. Ping @illusional .I have included a test case.