Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[AWS] Exit job with same exit code as rc file #6199

Open
wants to merge 7 commits into
base: develop
Choose a base branch
from

Conversation

henriqueribeiro
Copy link

On the current implementation of AWS backend, if there are no files to delocalize, AWS Batch will see the task as succeeded, even if it something fails on the command script. So, in the worst case, it can happen that for cromwell the task failed and for AWS Batch it succeeded.

With this change that I propose, after the delocalization process, we will exit the script with the same exit code as the one written on rc file.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants