[WX-1184] PostgreSQL Docker Image for Local Cromwell (#7172)

Co-authored-by: Janet Gainer-Dewar <[email protected]>

runConfigurations/Repo template_ Cromwell server TES Postgres.run.xml

@@ -0,0 +1,21 @@
+<component name="ProjectRunConfigurationManager">
+  <configuration default="false" name="Repo template: Cromwell server TES Postgres" type="Application" factoryName="Application">
+    <option name="ALTERNATIVE_JRE_PATH" value="$USER_HOME$/.sdkman/candidates/java/current" />
+    <envs>
+      <env name="CROMWELL_BUILD_CENTAUR_256_BITS_KEY" value="AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA=" />
+      <env name="CROMWELL_BUILD_CENTAUR_JDBC_DRIVER" value="org.postgresql.Driver" />
+      <env name="CROMWELL_BUILD_CENTAUR_JDBC_URL" value="jdbc:postgresql://localhost:5432/cromwell_test?reWriteBatchedInserts=true" />
+      <env name="CROMWELL_BUILD_CENTAUR_READ_LINES_LIMIT" value="128000" />
+      <env name="CROMWELL_BUILD_CENTAUR_SLICK_PROFILE" value="slick.jdbc.PostgresProfile$" />
+      <env name="CROMWELL_BUILD_PAPI_JSON_FILE" value="target/ci/resources/cromwell-centaur-service-account.json" />
+      <env name="CROMWELL_BUILD_RESOURCES_DIRECTORY" value="target/ci/resources" />
+    </envs>
+    <option name="MAIN_CLASS_NAME" value="cromwell.CromwellApp" />
+    <module name="cromwell" />
+    <option name="PROGRAM_PARAMETERS" value="server" />
+    <option name="VM_PARAMETERS" value="-Dconfig.file=src/ci/resources/tes_application.conf" />
+    <method v="2">
+      <option name="Make" enabled="true" />
+    </method>
+  </configuration>
+</component>

scripts/docker-postgres/postgresql-initdb.d/init.sh

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+#!/usr/bin/env bash
+
+cat << EOF >> /var/lib/postgresql/data/postgresql.conf
+max_connections = 300
+EOF

scripts/docker-postgres/postgresql-initdb.d/init.sql

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+create extension lo;

scripts/docker-postgres/start_postgres_docker.sh

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+# This script will launch a Postgres 11.3 container with parameters matching the expectations of Cromwell's CI configuration
+# You can run cromwell locally using this container as its DB.
+# Your intelliJ repo template or cromwell config should provide the following environment variables:
+# CROMWELL_BUILD_CENTAUR_JDBC_DRIVER="org.postgresql.Driver"
+# CROMWELL_BUILD_CENTAUR_SLICK_PROFILE="slick.jdbc.PostgresProfile$"
+# CROMWELL_BUILD_CENTAUR_JDBC_URL="jdbc:postgresql://localhost:5432/cromwell_test?reWriteBatchedInserts=true"
+
+set -euo pipefail
+
+CURRENT_DIR=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
+
+docker run \
+    --name=cromwell_postgres_test_db \
+    --env POSTGRES_USER=cromwell \
+    --env POSTGRES_PASSWORD=test \
+    --env POSTGRES_DB=cromwell_test \
+    --volume ${CURRENT_DIR}/postgresql-initdb.d:/docker-entrypoint-initdb.d \
+    --publish 5432:5432 \
+    --rm postgres:14