Releases: bpowell122/cryoSRPNT
Releases · bpowell122/cryoSRPNT
v0.1.0 - Initial release
Initial release of cryoSRPNT, accompanying the tomoDRGN bioarxiv preprint. Requires cryoDRGN for volume, image, and star file handling.
Key features:
- Project 3-D .mrc volumes to .mrcs image stacks
- with defined poses (choice of user-provided, healpy-sampled, or spherically-random-distributed) and translations (choice of uniform translation range)
- as either sum-along-z (for image data simulation) or max-along-z (for image mask simulation)
- optionally as a tilt series per-pose for simulating tilt series data
- Corrupt noiseless image stacks
- with defined CTF parameters and structural/shot noise levels
- optionally with tilt series dose and tilt weighting
- Generate a star file for the selected image stack in Relion v3.0 / Warp format for downstream image processing (e.g. cryoDRGN, tomoDRGN, etc.)