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Issues list

RuntimeError: cuDNN error: CUDNN_STATUS_MAPPING_ERROR
#85 by LeiHaoa was closed Nov 22, 2022
1
Zero coverage SNVs and their relation to deletions
#84 by emucaki was closed Jul 28, 2022
5
Error when running build.sh
#82 by atharva-bhagwat was closed Jun 28, 2022
2
The meaning of the input parameters
#70 by chloezhu was closed Mar 30, 2021
How to produce synthetic training data with different tumor purity and normal contamination ratio?
#69 by ZekunYin was closed Jan 12, 2021
2
which validate script you use?
#66 by LeiHaoa was closed Oct 29, 2020
2
Test fail
#64 by vymao was closed May 14, 2020
1
support for singularity?
#56 by GodloveD was closed Feb 28, 2020
2
AssertionError on fast_file.fetch()
#55 by GodloveD was closed Feb 5, 2020
5
Train.py Runtime Error
#54 by apptest20 was closed Feb 2, 2020
2
undefined symbol: _ZN3c107Warning4warnENS_14SourceLocationENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE
#49 by jingmeng-bioinformatics was closed Nov 1, 2019
2
preprocess unable to find candidates for training
#47 by SchKri was closed Sep 5, 2019
2
How could I use different NT samples to train some times，and then call variants
#45 by ggoodstudydaydayup was closed Jul 23, 2019
2
Ensemble method error in preprocess.py & generate_dataset.py
#37 by smalysz1 was closed May 13, 2019
4
ValueError: Image must be a numpy error
#36 by ozlemmuslu was closed May 7, 2019
3
Invalid VCF format [postprocess.py]
#34 by hdetering was closed Jun 4, 2019
1
RuntimeError: The size of tensor a (26) must match the size of tensor b (3) at non-singleton dimension 0 (call.py)
#33 by kiranchari was closed Mar 10, 2019
4
scan_alignments using up all remaining disk space (>100GB) and fails
#32 by kiranchari was closed Mar 10, 2019
8
Supplementary materials for NeuSomatic paper
#29 by gunjanbaid was closed Jan 28, 2019
2
fails in run_test.sh for "No such file 'work_standalone/work_tumor_without_q/work.0/count.bed''
#28 by mingyi-wang was closed Mar 1, 2019
1
CUDA example
#24 by lmiroslaw was closed Mar 1, 2019
3
RuntimeError: Expected object of type torch.DoubleTensor but found type torch.FloatTensor for argument #2 'weight'
#23 by jingmeng-bioinformatics was closed Dec 6, 2018
3
ensemble.tsv error
#19 by sugyun was closed Mar 1, 2019
3
Bed file from my bam file
#16 by sugyun was closed Oct 18, 2018
2
scan_alignments failed! when using "run_test.sh"
#14 by joonlee3 was closed Mar 1, 2019
5
ProTip! no:milestone will show everything without a milestone.