v2.18.0

[2.18.0] - 2025-03-07

2.18.0 Added

• Added support for Boltz-1 (Single Sequence Mode)
• Added support for Deepstabp
• Added support for Efficient Evolution
• Added support for Efficient Evolution
• Added support for ProteinMPNN-DDG
• Added support for PEP-Patch
• Added support for AggreScan 3D

v2.17.0

2.17.0 Added

• Added support for OpenFold2

v2.16.0

2.16.0 Added

• Added support for Colabfold-search workflow to generate MSA files.
• Added protein complex prediction workflow.

2.16.0 Changed

• Updated Chai-1 workflow to support MSA, template, and constraint files.
• Updated the indexed Uniref30 data source to S3.

v2.15.1

[2.15.1] - 2025-02-19

2.15.1 Fixed

• Updated container build logic in scripts/testrun.sh
• Added missing modules to README

v2.15.0

[2.15.0] - 2025-02-18

2.15.0 Added

• Added support for DiffAb antigen-specific design model from Helixon (PR 31)
• Added support for Humatch mAb humanization model from Oxford Protein Informatics Group (PR 32)

2.15.0 Fixed

• Update transformers version per CVE-2024-11393.

v2.14.1

[2.14.1] - 2025-01-29

2.14.1 Fixed

• Added missing region variable to Chai-1 base image.
• Updated container build script to better handle missing remote repository credentials.

v2.14.0

[2.14.0] - 2025-01-13

2.14.0 Fixed

• Updated Uniref30 database to most recent version (2023-02) to avoid known HHBlits issue described at google-deepmind/alphafold#810.

v2.13.0

[2.13.0] - 2025-01-08

2.13.0 Changed

• Updated EvoProtGrad directed evolution workflow to include fine-tuned regression expert.
• Added additional license information to container scripts.

v2.12.0

[2.12.0] - 2025-01-03

2.12.0 Added

• Added MMseqs2 workflow

2.12.0 Changed

• Updated AlphaFold2-Multimer workflow to support multiple input fasta files

v2.11.0

[2.11.0] - 2024-12-18

2.11.0 Added

• Added AntiFold workflow