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Dev#779

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sundusaijaz merged 38 commits intomasterfrom
dev
Jan 20, 2026
Merged

Dev#779
sundusaijaz merged 38 commits intomasterfrom
dev

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@stefaanhessmann
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jnsLs and others added 30 commits June 24, 2025 18:10
* fix bug in atoms metadata
* fix(datasets): existing_datasets is never used -> remove
* extra

* Add unit tests for offset transformations in atomistic models

* Refactor test_offset.py for more molecule

* Improve test output readability

* Refactor test_offset.py

* Add pytest in  test_offset.py

* Enhance tests in test_offset.py for extensive and intensive property relationships

* Refactor atomistic.py and update test cases in test_offset.py

* Refactor test fixtures in test_offset.py

* Remove redundant none tests in test_offset.py

* Refactor dummy inputs and add helper functions for molecule processing in test_offset.py

* Enhance test coverage in test_offset.py by adding extensive and intensive property tests

* Update test_offset.py to test batch and single AddOffset

* Refactor loop indices in test_offset.py for clarity

* Remove i in loop

* Refactor RemoveOffsets class to compute atom reference bias using scatter_add

* Refactor RemoveOffsets class to simplify atom reference bias calculation
fix: use literal strings for strings containing invalid escape backslashes
Actually use the EMA loss in `ReduceLROnPlateau`
[RFC] fix(torch.load usage): use weights_only=True/False in torch.load to avoid future torch breakage
Clarify usage of the 'uuid' resolver in the documentation.
* added two new neighbor lists

* added new requirements
Removed 'pytest-benchmark' from the main dependencies.
Remove 'pytest-benchmark' from dependencies
fix(triples): fix triples computation
jnsLs and others added 8 commits December 17, 2025 12:08
…atgen_nbhlist

Jl/remove pymatgen nbhlist
* Refactor metadata handling in ASEAtomsData to use context manager for database connection.

* black formatting

* Remove unused conn parameter in _add_system method

* Remove commented-out code for the _add_system method in ASEAtomsData
…t ndownloader.figshare (#774)

* fix: previous url for qm9 is change to springnature

* feat: revert back the old url and add the new one as fallback
@sundusaijaz sundusaijaz merged commit 09b2551 into master Jan 20, 2026
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7 participants