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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,8 @@ | ||
| #!/bin/bash | ||
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| source ~/.bash_profile | ||
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| fink_db -s ztf --merge | ||
| fink_db -s ztf --main_table | ||
| fink_db -s ztf --index_tables | ||
| fink_db -s ztf --clean_night |
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,163 @@ | ||
| #!/bin/bash | ||
| # Copyright 2019-2025 AstroLab Software | ||
| # Author: Julien Peloton | ||
| # | ||
| # Licensed under the Apache License, Version 2.0 (the "License"); | ||
| # you may not use this file except in compliance with the License. | ||
| # You may obtain a copy of the License at | ||
| # | ||
| # http://www.apache.org/licenses/LICENSE-2.0 | ||
| # | ||
| # Unless required by applicable law or agreed to in writing, software | ||
| # distributed under the License is distributed on an "AS IS" BASIS, | ||
| # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. | ||
| # See the License for the specific language governing permissions and | ||
| # limitations under the License. | ||
| source ~/.bash_profile | ||
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||
| # Grab the command line arguments | ||
| while [ "$#" -gt 0 ]; do | ||
| case "$1" in | ||
| -h) | ||
| HELP_ON_SERVICE="-h" | ||
| shift 1 | ||
| ;; | ||
| -c) | ||
| conf="$2" | ||
| shift 2 | ||
| ;; | ||
| --poll_only) | ||
| POLL_ONLY=true | ||
| shift 2 | ||
| ;; | ||
| --enrich_only) | ||
| ENRICH_ONLY=true | ||
| shift 2 | ||
| ;; | ||
| --distribute_only) | ||
| DISTRIBUTE_ONLY=true | ||
| shift 2 | ||
| ;; | ||
| -night) | ||
| NIGHT="$2" | ||
| shift 2 | ||
| ;; | ||
| -stop_at) | ||
| STOP_AT="$2" | ||
| shift 2 | ||
| ;; | ||
| -*) | ||
| echo "unknown option: $1" >&2 | ||
| exit 1 | ||
| ;; | ||
| *) | ||
| echo "unknown argument: $1" >&2 | ||
| exit 1 | ||
| ;; | ||
| esac | ||
| done | ||
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| if [[ ! $NIGHT ]]; then | ||
| # Current night | ||
| NIGHT=`date +"%Y%m%d"` | ||
| fi | ||
| echo "Processing night ${NIGHT}" | ||
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| # Check if the conf file exists | ||
| if [[ -f $conf ]]; then | ||
| echo "Reading custom Fink configuration file from " $conf | ||
| else | ||
| echo "Reading default Fink conf from " ${FINK_HOME}/conf/${SURVEY}/fink.conf.prod | ||
| conf=${FINK_HOME}/conf/${SURVEY}/fink.conf.prod | ||
| fi | ||
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| if [[ ! ${STOP_AT} ]]; then | ||
| STOP_AT='20:00 today' | ||
| fi | ||
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| # stream2raw | ||
| if [[ ! ${ENRICH_ONLY} ]] && [[ ! ${DISTRIBUTE_ONLY} ]]; then | ||
| echo "Launching stream2raw" | ||
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| LEASETIME=$(( `date +'%s' -d ${STOP_AT}` - `date +'%s' -d 'now'` )) | ||
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| nohup ${FINK_HOME}/bin/fink start stream2raw \ | ||
| -s ztf \ | ||
| -c ${FINK_HOME}/conf/ztf/fink.conf.prod \ | ||
| -topic "ztf_${NIGHT}.*" \ | ||
| -night $NIGHT \ | ||
| -driver-memory 4g -executor-memory 2g \ | ||
| -spark-cores-max 4 -spark-executor-cores 1 \ | ||
| -exit_after ${LEASETIME} > ${FINK_HOME}/broker_logs/stream2raw_${NIGHT}.log 2>&1 & | ||
| fi | ||
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| # raw2science | ||
| if [[ ! ${POLL_ONLY} ]] && [[ ! ${DISTRIBUTE_ONLY} ]]; then | ||
| echo "Launching raw2science" | ||
| while : ; do | ||
| # check folder exist | ||
| $(hdfs dfs -test -d /user/julien.peloton/online/raw/${NIGHT}) | ||
| if [[ $? == 0 ]]; then | ||
| # check folder is not empty | ||
| isEmpty=$(hdfs dfs -count /user/julien.peloton/online/raw/${NIGHT} | awk '{print $2}') | ||
| if [[ $isEmpty > 0 ]]; then | ||
| echo "Data detected." | ||
| echo "Waiting 60 seconds for one batch to complete before launching..." | ||
| sleep 60 | ||
| echo "Launching service" | ||
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| # LEASETIME must be computed by taking the | ||
| # difference between now and max end (8pm CE(S)T) | ||
| LEASETIME=$(( `date +'%s' -d ${STOP_AT}` - `date +'%s' -d 'now'` )) | ||
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| nohup ${FINK_HOME}/bin/fink start raw2science \ | ||
| -s ztf \ | ||
| -c ${FINK_HOME}/conf/ztf/fink.conf.prod \ | ||
| -driver-memory 4g -executor-memory 2g \ | ||
| -spark-cores-max 8 -spark-executor-cores 1 \ | ||
| -night ${NIGHT} \ | ||
| -exit_after ${LEASETIME} > ${FINK_HOME}/broker_logs/raw2science_${NIGHT}.log 2>&1 & | ||
| break | ||
| fi | ||
| fi | ||
| DDATE=`date` | ||
| echo "${DDATE}: no data yet. Sleeping 300 seconds..." | ||
| sleep 300 | ||
| done | ||
| fi | ||
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| # distribution | ||
| if [[ ! ${POLL_ONLY} ]] && [[ ! ${ENRICH_ONLY} ]]; then | ||
| echo "Launching distribution" | ||
| while true; do | ||
| # check folder exist | ||
| $(hdfs dfs -test -d /user/julien.peloton/online/science/${NIGHT}) | ||
| if [[ $? == 0 ]]; then | ||
| # check folder is not empty | ||
| isEmpty=$(hdfs dfs -count /user/julien.peloton/online/science/${NIGHT} | awk '{print $2}') | ||
| if [[ $isEmpty > 0 ]]; then | ||
| echo "Data detected." | ||
| echo "Waiting 60 seconds for one batch to complete before launching..." | ||
| sleep 60 | ||
| echo "Launching service..." | ||
| # LEASETIME must be computed by taking the | ||
| # difference between now and max end (8pm CEST) | ||
| LEASETIME=$(( `date +'%s' -d ${STOP_AT}` - `date +'%s' -d 'now'` )) | ||
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| nohup ${FINK_HOME}/bin/fink start distribution \ | ||
| -s ztf \ | ||
| -c ${FINK_HOME}/conf/fink.conf.prod \ | ||
| -conf_distribution ${FINK_HOME}/conf/ztf/fink.conf.distribution_cluster \ | ||
| -night ${NIGHT} \ | ||
| -driver-memory 4g -executor-memory 2g \ | ||
| -spark-cores-max 4 -spark-executor-cores 1 \ | ||
| -exit_after ${LEASETIME} > ${FINK_HOME}/broker_logs/distribute_${NIGHT}.log 2>&1 & | ||
| break | ||
| fi | ||
| fi | ||
| DDATE=`date` | ||
| echo "${DDATE}: no data yet. Sleeping 300 seconds..." | ||
| sleep 300 | ||
| done | ||
| fi | ||
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