Auto-derive symlinks and add bootstrap.sh reconstruction pipeline#23
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Issue #22 — init-symlinks.sh: - Replace static LINKS array with dynamic discovery from collections/*/ - Naming convention: NAME/pdfs → LIBRARY_BASE/NAME, NAME/indexed → LIBRARY_BASE/library-indexed/NAME, findings → LIBRARY_BASE/library-findings - LINKS array defined in .env takes precedence over auto-discovery Issue #21 — bootstrap.sh: - Full reconstruction pipeline from a clean clone - Validates .env and LIBRARY_BASE, initialises lib/pfb submodule if needed - Creates cloud-storage directories, runs init-symlinks.sh - Downloads PDFs per collection using Source URL from COLLECTION.md - Converts PDFs to Markdown, regenerates CATALOGUE.md - Idempotent: skips collections already downloaded or converted Docs: - Update CLAUDE.md project layout and common commands - Update README.md with one-command bootstrap workflow and symlink override docs - Update AGENTS.md, GEMINI.md, .github/copilot-instructions.md Tools sections Closes #21, closes #22 Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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Summary
init-symlinks.sh— replaces the staticLINKSarray with dynamic discovery fromcollections/*/. Uses the naming convention built into the template:NAME/pdfs → LIBRARY_BASE/NAME,NAME/indexed → LIBRARY_BASE/library-indexed/NAME,findings → LIBRARY_BASE/library-findings. Instances that need non-standard paths can define aLINKSarray in.envto override.bootstrap.sh— new full reconstruction pipeline. From a clean clone with.envconfigured, one command creates cloud directories, restores symlinks, downloads PDFs (Source URL fromCOLLECTION.md), converts to Markdown, and regeneratesCATALOGUE.md. Fully idempotent.bootstrap.shandinit-symlinks.shin their Tools sections.README.mdandCLAUDE.mdupdated with the new one-command setup workflow.Test plan
bash -n init-symlinks.sh— no syntax errorsbash -n bootstrap.sh— no syntax errorscollections/subdirs,init-symlinks.shwithLIBRARY_BASEset warns and exits cleanlyinit-symlinks.shauto-derives the correct link pairsLINKSarray in.envtakes precedence over auto-discoverybootstrap.shexits with a clear error if.envis missing orLIBRARY_BASEis unsetbootstrap.shskips collections with no Source URL inCOLLECTION.mdbootstrap.shon a fully-built library skips all download and convert stepsCloses #21, closes #22
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