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Merge pull request brycejohnston#14 from Agroecology-Lab/master
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Alphabetical again
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brycejohnston authored Mar 30, 2022
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- [Calculators](#calculators)
- [Climate, Environment and Weather](#climate-environment-and-weather)
- [Crop Modeling, Phenotyping, and Pathology](#crop-modeling-phenotyping-and-pathology)
- [Datasets, Machine Learning and AI](#datasets-machine-learning-and-ai)
- [Datasets](#datasets)
- [Machine Learning and AI](#machine-learning-and-ai)
- [Data Standardization, Interoperability and APIs](#data-standardization-interoperability-and-apis)
- [Farm Management Systems and Record Keeping](#farm-management-systems-and-record-keeping)
- [Geospatial and GIS](#geospatial-and-gis)
- [IoT, Hardware, Automation and Robotics](#iot-hardware-automation-and-robotics)
- [Automation and Robotics](#automation-and-robotics)
- [IoT, Hardware](#iot-hardware)
- [Knowledgebases and Learning Resources](#knowledgebases-and-learning-resources)
- [Remote Sensing and Imagery](#remote-sensing-and-imagery)

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- [Open Plant Pathology](https://www.openplantpathology.org/) - A community that values open data and computational tools for advancing epidemiology and pathogen population biology and ecology.

## Datasets, Machine Learning and AI
## Datasets,
- [Growstuff](https://www.growstuff.org/crops) Record keeping & crop database, nice API
- [CWFID](https://github.com/cwfid/dataset) - Dataset comprising field images, vegetation segmentation masks and crop/weed plant type annotations.
- [TERRA REF](https://terraref.org) -> 1PB public domain high resolution sensor data from sorghum breeding trials ([data publication](https://doi.org/10.5061/dryad.4b8gtht99) with large files available on [globus.org at ncsa#terra-public](https://app.globus.org/file-manager?origin_id=e8feaff4-96cd-11ea-bf90-0e6cccbb0103&origin_path=%2F))

## Machine Learning and AI
- [agridat](https://github.com/kwstat/agridat) - R package providing an extensive collection of datasets from agricultural experiments.
- [Crop Yield Prediction](https://github.com/JiaxuanYou/crop_yield_prediction) - Deep gaussian process for crop yield prediction based on remote sensing data.
- [CWFID](https://github.com/cwfid/dataset) - Dataset comprising field images, vegetation segmentation masks and crop/weed plant type annotations.
- [Deep Learning for Biologists with Keras](https://github.com/totti0223/deep_learning_for_biologists_with_keras) - Tutorials for deep learning based analysis (mainly) on biological relavent themes.
- [PlantCV](https://github.com/danforthcenter/plantcv) - Plant phenotyping software using computer vision.
- [TERRA REF](https://terraref.org) -> 1PB public domain high resolution sensor data from sorghum breeding trials ([data publication](https://doi.org/10.5061/dryad.4b8gtht99) with large files available on [globus.org at ncsa#terra-public](https://app.globus.org/file-manager?origin_id=e8feaff4-96cd-11ea-bf90-0e6cccbb0103&origin_path=%2F))

## Data Standardization, Interoperability and APIs

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- [MyJohnDeereAPI-OAuth-Python-Client](https://github.com/JohnDeere/MyJohnDeereAPI-OAuth-Python-Client) - Python MyJohnDeere API client implementation.
- [MyJohnDeereAPI-OAuth-Python3-Client](https://github.com/JohnDeere/MyJohnDeereAPI-OAuth-Python3-Client) - Python3 MyJohnDeere API client implementation.
- [MyJohnDeereAPI-OAuth-Ruby-Client](https://github.com/JohnDeere/MyJohnDeereAPI-OAuth-Ruby-Client) - Ruby MyJohnDeere API client implementation.
- [OpenTeam](https://openteam.community/) - Open Technology Ecosystem for Agricultural Management
- [SampleData](https://github.com/JohnDeere/SampleData) - Sample datacards, shapefiles, and other files you can use for testing.
- [SencropAPI-JavaScript-Client](https://github.com/sencrop/sencrop-js-api-client) - Sencrop API Javascript client implementation. Read and manage Sencrop weather stations.

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## Automation and Robotics

- [Earth Rover](https://github.com/earthrover) Ag AGV ROS1) precision farming rover,
- [Ant Robotics](https://antrobotics.de/) development from Ecoterra bot
- [Acorn Rover](https://github.com/Twisted-Fields) precision farming rover, Odrive, Python.
- [Earth Rover](https://github.com/earthrover) Ag AGV ROS1) precision farming rover,
- [EcoTerra Bot](https://ecoterrabot.com/) Delta & Rover
- [FarmBot](https://github.com/farmbot) - Open source precision gardening project.
- [Romi project](https://media.romi-project.eu/documents/index.html) Europe-funded research project
- [Weedinator](https://hackaday.io/project/53896-weedinator-2019) Line following /weeding robot
- [ROS Agriculture](http://rosagriculture.org/) - Open Source community focusing on using Robot Operating System to empower farmers with robotics tools.
- [FarmBot](https://github.com/farmbot) - Open source precision gardening project.



- [Weedinator](https://hackaday.io/project/53896-weedinator-2019) Line following /weeding robot

## IoT, Hardware

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