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Added Open Technology Ecosystem for Agricultural Management
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samuk authored Feb 19, 2022
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- [Calculators](#calculators)
- [Climate, Environment and Weather](#climate-environment-and-weather)
- [Crop Modeling, Phenotyping, and Pathology](#crop-modeling-phenotyping-and-pathology)
- [Datasets, Machine Learning and AI](#datasets-machine-learning-and-ai)
- [Datasets](#datasets)
- [Machine Learning and AI](#machine-learning-and-ai)
- [Data Standardization, Interoperability and APIs](#data-standardization-interoperability-and-apis)
- [Farm Management Systems and Record Keeping](#farm-management-systems-and-record-keeping)
- [Geospatial and GIS](#geospatial-and-gis)
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- [Open Plant Pathology](https://www.openplantpathology.org/) - A community that values open data and computational tools for advancing epidemiology and pathogen population biology and ecology.

## Datasets, Machine Learning and AI
## Datasets,
- [Growstuff](https://www.growstuff.org/crops) Record keeping & crop database, nice API
- [CWFID](https://github.com/cwfid/dataset) - Dataset comprising field images, vegetation segmentation masks and crop/weed plant type annotations.
- [TERRA REF](https://terraref.org) -> 1PB public domain high resolution sensor data from sorghum breeding trials ([data publication](https://doi.org/10.5061/dryad.4b8gtht99) with large files available on [globus.org at ncsa#terra-public](https://app.globus.org/file-manager?origin_id=e8feaff4-96cd-11ea-bf90-0e6cccbb0103&origin_path=%2F))

## Machine Learning and AI
- [agridat](https://github.com/kwstat/agridat) - R package providing an extensive collection of datasets from agricultural experiments.
- [Crop Yield Prediction](https://github.com/JiaxuanYou/crop_yield_prediction) - Deep gaussian process for crop yield prediction based on remote sensing data.
- [CWFID](https://github.com/cwfid/dataset) - Dataset comprising field images, vegetation segmentation masks and crop/weed plant type annotations.
- [Deep Learning for Biologists with Keras](https://github.com/totti0223/deep_learning_for_biologists_with_keras) - Tutorials for deep learning based analysis (mainly) on biological relavent themes.
- [PlantCV](https://github.com/danforthcenter/plantcv) - Plant phenotyping software using computer vision.
- [TERRA REF](https://terraref.org) -> 1PB public domain high resolution sensor data from sorghum breeding trials ([data publication](https://doi.org/10.5061/dryad.4b8gtht99) with large files available on [globus.org at ncsa#terra-public](https://app.globus.org/file-manager?origin_id=e8feaff4-96cd-11ea-bf90-0e6cccbb0103&origin_path=%2F))

## Data Standardization, Interoperability and APIs

- [OpenTeam](https://openteam.community/) - Open Technology Ecosystem for Agricultural Management
- [AgGateway’s ADAPT Toolkit](https://adaptframework.org) - Open Source project providing tools to simplify communication between growers, their machines, and their partners.
- [Agstack](https://agstack.org) - Open-Source Digital Infrastructure for the Agriculture Ecosystem
- [agworld_api_client](https://github.com/agworld/agworld_api_client) - Example Agworld API Ruby client library that is compliant with specification defined by jsonapi.org.
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