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19 Open 16 Closed
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Issues list

hs.create_modules is a random number seed set in this function, why do I run the same code every time the number of modules is not consistent
#46 opened Feb 24, 2025 by ZhangZao-HB
compute_local_correlations not stop
#44 opened Dec 25, 2024 by solivehong
Supporting the analysis of multi-sample SRT data
#43 opened Dec 5, 2024 by Antidington
hs.module_scores return nothing
#42 opened Nov 28, 2024 by lvmt
Release a new version
#39 opened May 30, 2024 by tanliwei-genomics-cn
2
Autocorrelations of subset of genes against all genes
#38 opened May 24, 2024 by jnmark
10x visium data
#37 opened Mar 15, 2024 by wangjiawen2013
Getting 5 times more gene in a module than min_gene_threshold
#36 opened Feb 14, 2024 by amissarova
1
Image parameter description
#35 opened Feb 4, 2024 by Zhenbin24
Question about scalability
#34 opened Aug 9, 2023 by smorabit
saving hotspot result (hs and module)
#33 opened Jul 4, 2023 by parkjooyoung99
1
Running hotspot on integrated data
#32 opened Apr 28, 2023 by bbergsneider
3
How to save a Hotspot object for spatial data?
#30 opened Oct 11, 2022 by aaadc
InvalidIndexError: (slice(None, None, None), (0, 1)) when using sc.pl.spatial
#29 opened Jul 25, 2022 by Flyingcattle
3
ValueError
#27 opened Jul 1, 2022 by tongjiezhao
5
Run Hotspot without umi-count normalization
#25 opened Jun 1, 2022 by TangLabsysu2020
create_modules speed up
#24 opened May 30, 2022 by wangjiawen2013
4
Question about phylogenetic tree type
#11 opened Dec 21, 2021 by tenlives
Return figure in plot_local_correlations enhancement New feature or request
#8 opened Jul 6, 2021 by deto
ProTip! What’s not been updated in a month: updated:<2025-02-03.