NF1_3D_organoid_profiling_pipeline

This pipeline is for processing the NF1 organoid data. More documentation to come soon.

Name		Name	Last commit message	Last commit date
Latest commit History 56 Commits
0.preprocessing_data		0.preprocessing_data
1.image_quality_control		1.image_quality_control
2.segment_images		2.segment_images
3.cellprofiling		3.cellprofiling
4.processing_image_based_profiles		4.processing_image_based_profiles
5.EDA		5.EDA
6.dynamic_viz_Rshiny		6.dynamic_viz_Rshiny
environments		environments
figures		figures
nextflow_pipeline		nextflow_pipeline
utils		utils
.gitignore		.gitignore
.pre-commit-config.yaml		.pre-commit-config.yaml
LICENSE		LICENSE
README.md		README.md

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