Migrate to uv #1393
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| name: integration tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| paths: | |
| - .pre-commit-config.yaml | |
| - .github/workflows/unit_tests.yml | |
| - .github/workflows/integration_tests.yml | |
| - '**.py' | |
| - '**.ipynb' | |
| - '**.html' | |
| - '**.jinja' | |
| - '**.js' | |
| - uv.lock | |
| - pyproject.toml | |
| - '**.rst' | |
| - '**.md' | |
| - docs/cyclops-webpage | |
| pull_request: | |
| branches: | |
| - main | |
| paths: | |
| - .pre-commit-config.yaml | |
| - .github/workflows/unit_tests.yml | |
| - .github/workflows/integration_tests.yml | |
| - '**.py' | |
| - '**.ipynb' | |
| - '**.html' | |
| - '**.jinja' | |
| - '**.js' | |
| - uv.lock | |
| - pyproject.toml | |
| - '**.rst' | |
| - '**.md' | |
| - docs/cyclops-webpage | |
| jobs: | |
| integration-tests: | |
| runs-on: [self-hosted, gpu, db, cyclops] | |
| steps: | |
| - uses: actions/[email protected] | |
| - name: Install uv | |
| uses: astral-sh/setup-uv@4db96194c378173c656ce18a155ffc14a9fc4355 | |
| with: | |
| # Install a specific version of uv. | |
| version: "0.5.21" | |
| enable-cache: true | |
| - name: "Set up Python" | |
| uses: actions/setup-python@42375524e23c412d93fb67b49958b491fce71c38 | |
| with: | |
| python-version-file: ".python-version" | |
| - name: Install project and check code | |
| run: | | |
| export PATH=/opt/openmpi-4.1.5/bin:$PATH | |
| export LD_LIBRARY_PATH=/opt/openmpi-4.1.5/lib:$LD_LIBRARY_PATH | |
| ompi_info | |
| env MPICC=/opt/openmpi-4.1.5/bin/mpicc uv sync --all-extras --dev --group test | |
| source .venv/bin/activate | |
| mpirun -n 2 python -m pytest --only-mpi | |
| pytest -m integration_test --cov-report term --cov-report xml:./coverage.xml --cov=cyclops -n auto --dist loadscope | |
| - name: Upload coverage to Codecov | |
| uses: Wandalen/[email protected] | |
| with: | |
| action: codecov/[email protected] | |
| with: | | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ./coverage.xml | |
| name: codecov-umbrella | |
| fail_ci_if_error: false | |
| attempt_limit: 5 | |
| attempt_delay: 30000 |