Change test workflow to reuse standard test workflow from MatBox

.github/workflows/prepare-release.yml

@@ -3,7 +3,7 @@ name: Prepare toolbox release
 on:
   push:
     tags:
-      - 'v*'
+      - 'v[0-9]+.[0-9]+.[0-9]+' # Matches tags like v1.2.3
   workflow_dispatch:
     inputs:
       version:
@@ -29,6 +29,8 @@ jobs:
       # Path to directory containing tools and MLToolboxInfo.json. Used for finding
       # unit tests, running customized MatBox tasks, and determining toolbox metadata
       tools_directory: tools
+
+      matlab_products: Statistics_and_Machine_Learning_Toolbox
 
     secrets:
       # SSH deploy key for pushing to protected branches. Required for creating

.github/workflows/run_tests.yml

@@ -7,86 +7,26 @@ on:
     paths-ignore:
       - '*.md'
       - '.github/workflows/**'
-      - 'docs/reports/**'
   pull_request:
     branches: [ "main" ]
     paths-ignore:
       - '*.md'
       - '.github/workflows/**'
-      - 'docs/reports/**'
 
   # Allows for manually running this workflow from the Actions tab
   workflow_dispatch:
 
-jobs:
-  # This workflow contains a single job called "test"
-  test:
-    name: Test toolbox code
-    # The type of runner that the job will run on
-    runs-on: ubuntu-latest
-
-    # Steps represent a sequence of tasks that will be executed as part of the job
-    steps:
-      # Checks-out the repository under $GITHUB_WORKSPACE, so the job can access it
-      - name: Check out repo
-        uses: actions/checkout@v4
-
-      - name: Set up MATLAB
-        uses: matlab-actions/setup-matlab@v2
-        with:
-          release: R2021b
-          products: Statistics_and_Machine_Learning_Toolbox
-
-      - name: Check for MATLAB code issues
-        uses: matlab-actions/run-command@v2
-        if: always()
-        with:
-          command: | 
-            addpath(genpath("tools"));
-            codecheckToolbox()
-
-      - name: Run tests
-        uses: matlab-actions/run-command@v2
-        if: always()
-        with:
-          command: |
-            addpath(genpath("tools"));
-            testToolbox()
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
 
-      # Commit updated SVG badges for the issues and tests (if changed)
-      - name: Commit SVG badges
-        if: always()
-        continue-on-error: true
-        run: |
-          git config user.name "${{ github.workflow }} by ${{ github.actor }}"
-          git config user.email "<>"
-          git fetch
-
-          if [[ $(git add .github/badges/* --dry-run | wc -l) -gt 0 ]]; then
-            git add .github/badges/*
-            git commit -m "Update code issues and tests badges"
-            git push -f
-          else
-            echo "Nothing to commit"
-          fi
-
-      - name: Upload code coverage report to Codecov
-        uses: codecov/codecov-action@v4
-        if: always()
-        with:
-          token: ${{ secrets.CODECOV_TOKEN }}
-          files: docs/reports/codecoverage.xml
-
-      - name: Publish test results
-        uses: EnricoMi/publish-unit-test-result-action@v2
-        if: always()
-        with:
-          files: "docs/reports/test-results.xml"
-
-      # Save the contents of the reports directory as an artifact
-      - name: Save reports directory
-        uses: actions/upload-artifact@v4
-        if: always()
-        with:
-          name: reports
-          path: docs/reports
+jobs:
+  call-reusable-test-toolbox-workflow:
+    name: Test and analyse code
+    uses: ehennestad/matbox/.github/workflows/[email protected]
+    with:
+      matlab_release: R2021b
+      matlab_use_cache: true
+      matlab_products: Statistics_and_Machine_Learning_Toolbox
+    secrets:
+      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

.gitignore

@@ -1,7 +1,6 @@
 # Ignore Mac DS_Store files and other known temporary files
 .DS_Store
 docs/reports/*
-!docs/reports/badge
 releases/
 *.tmp
 *.swp

code/+did/database.m

@@ -434,7 +434,7 @@ function add_docs(database_obj, document_objs, branch_id, varargin)
             % Optional PARAMETERS may be specified as P-V pairs of parameter name
             % followed by parameter value. The following parameters are accepted:
             %   - 'OnDuplicate' - followed by 'ignore', 'warn', or 'error' (default)
-            %   - 'Validate' - folowed by false or true (default)
+            %   - 'Validate' - followed by false or true (default)
 
             % Ensure we got a valid input doc object
             if isempty(document_objs)

code/+did/ido.m

@@ -84,8 +84,8 @@
             % B = isvalid(ID)
             %
             % Returns true if ID matches the structure of a did.ido identifier and
-            % false otherwise. A valid ID must have 16 hexidecimal digits in
-            % 0-9 or a-f, an underscore, and then 16 more hexidecimal digits.
+            % false otherwise. A valid ID must have 16 hexadecimal digits in
+            % 0-9 or a-f, an underscore, and then 16 more hexadecimal digits.
 
             try
                 id = char(id);

code/Contents.m

@@ -1,5 +1,5 @@
 % Data Interface Database
-% Version 0.7.9 (R2019b+) 17-Oct-2024
+% Version 0.9.0 (R2019b+) 08-Jun-2025
 %
-% Copyright (c) 2024, VanHooser Lab
+% Copyright (c) 2025, VanHooser Lab
 % ---------------------------------

tools/tasks/codecheckToolbox.m

@@ -1,5 +1,4 @@
 function codecheckToolbox()
-    installMatBox("commit")
     projectRootDirectory = didtools.projectdir();
     matbox.tasks.codecheckToolbox(projectRootDirectory, "CreateBadge", false)
 end

tools/tasks/packageToolbox.m

@@ -1,9 +1,9 @@
-function packageToolbox(releaseType, versionString)
+function [newVersion, mltbxPath] = packageToolbox(releaseType, versionString)
     arguments
         releaseType {mustBeTextScalar,mustBeMember(releaseType,["build","major","minor","patch","specific"])} = "build"
         versionString {mustBeTextScalar} = "";
     end
-    installMatBox('commit')
     projectRootDirectory = didtools.projectdir();
-    matbox.tasks.packageToolbox(projectRootDirectory, releaseType, versionString, "ToolboxShortName", "DID_MATLAB")
+    [newVersion, mltbxPath] = matbox.tasks.packageToolbox(projectRootDirectory, ...
+        releaseType, versionString, "ToolboxShortName", "DID_MATLAB");
 end

tools/tasks/testToolbox.m

@@ -1,7 +1,5 @@
 function testToolbox(varargin)
-    installMatBox("commit")
     projectRootDirectory = didtools.projectdir();
     matbox.installRequirements(projectRootDirectory)
-
     matbox.tasks.testToolbox(projectRootDirectory, "CreateBadge", false, varargin{:})
 end