Outwasher pull request - tools folder update#51

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Commits on Jan 13, 2023

had issue with line 181 from yaml function when running cascade. made an edit but left original line commented out
Lexi Van Blunk
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line 620: barrier3d does not have PreStor_InteriorDomain so I have currently changed it to just the InteriorDomain (for running cascade)
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updated time step print statement
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outwash edits plus added an input for the outwash_data folder
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new Ki analysis now that outwasher works the way we want
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Commits on Jan 16, 2023

made variable for saving all velocities and flow rates. compiled functions together for efficiency
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Commits on Jan 19, 2023

back to original with the PreStorm_InteriorDomain
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back to original after pulling master brie
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lexi cascade updates
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outwasher jupyter notebooks for testing
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Commits on Jan 20, 2023

jupyter notebook for saving cascade b3d domains
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notebook for running cascade with outwash
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added the check for outwash at the beginning of this script instead of in cascade or a notebook
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updated to include outwash
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Commits on Jan 25, 2023

updated the outwash variables for interior and dune domain in the update function
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notebooks for running outwasher with cascade
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new combined outwash storm series. first column is year and second column is hydrograph
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notebook for saving domains
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changing substep and print statement
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using the full hydrograph from chris. there were no changes to the total erosion
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running more cascade/outwash configurations
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Commits on Jan 27, 2023

updated to include percent outwash to shoreface
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renamed files based on katherine's git update
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updated to be the same as barrier3d version_1_local_copy files
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deleted
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deleted, old storm configurations for testing
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Commits on Jan 30, 2023

Commits on Feb 1, 2023

Merge branch 'main' into avanblunk-cascade
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Commits on Feb 4, 2023

edited the outwash inputs
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Commits on Feb 16, 2023

python files for converting NCB DEM into numpy array
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Commits on Feb 19, 2023

edits to try and get a correct domain
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printed some things for thesis
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Commits on Feb 21, 2023

uploading new data
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Commits on Feb 23, 2023

re-wrote flow routing function
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Commits on Feb 28, 2023

set dune row to 30.0 as default in this file
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Commits on Mar 3, 2023

updated the flow routing initialization to handle full dune or first dune
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added the outwasher inputs to specify dune dynamics for flow routing
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Commits on Mar 6, 2023

python file for converting txt file from Chris (m MSL) to outwasher storm series
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added inputs for a beach file and to specify the dune dynamics (consider full dune domain or just the first row)
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changed dune width back to 20.0
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added input for outwasher substep
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Commits on Mar 9, 2023

think I updated the flow routing for outwasher to include larger area of cells
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specifying new domain size
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added a plot for the 24 hrs we use
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added DuneParamMultipleRows to outwash yaml
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generated many hydrographs
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modified domain
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Commits on Mar 13, 2023

newest version of outwasher that implements different discharge allocation based on if we are bayside of the dune line or oceanside of the dune line
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Commits on Mar 16, 2023

many new functions, 1 for determining if the bay level is higher than the entire domain, 1 for determining the downhill cells connected to the dune gaps, and making the "full" dunes work again
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edited for new elevations and storms
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added an input for outwasher Ki value
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different versions of NCB domain
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different versions of hydrograph
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added variable to store the bay array
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Commits on Mar 20, 2023

re-arranged the order of some steps to increase efficiency
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Commits on Mar 23, 2023

newest FR
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Commits on Apr 3, 2023

most updated outwasher, Brad and Katherine interpretation of cons. of flow for flow routing
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Commits on Apr 5, 2023

input domain files in dam and meters
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input domain files in dam and meters
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6 min storm series every 20 years rather than every 10
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beach file we have been using renamed to defualt beach
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Commits on Apr 7, 2023

plots the dunes with the interior elevation from cascade
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outwasher's yaml, set berm elevation, MHW, and beta
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added outwash volume and outwash flux variables to track per outwash event
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changed the outwasher import since I renamed the file
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Merge branch 'main' into avanblunk-cascade
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Merge branch 'main' into avanblunk-cascade
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Commits on Apr 8, 2023

stored more parameters in arrays to make into figures
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aded more figures to track progress and make sure I was saving everything in the correct untis
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updated for berm elevation
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changes to plot figures
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saving more variables
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Commits on Apr 10, 2023

updated input files
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Commits on Apr 20, 2023

updated saved variables
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Commits on Apr 26, 2023

yaml for outwash runs
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Commits on Apr 27, 2023

changed dmaxel to 6.2 m NAVD88
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Commits on Apr 30, 2023

updated outwash volume and flux variables
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Commits on May 4, 2023

updated max dun height
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Commits on May 15, 2023

added update to avg interior height
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Commits on Jun 5, 2023

converting the ADCIRC data from USGS. includes changing the frequency of the data and building the storm series array with year and hydrograph
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Commits on Jun 6, 2023

renamed to indicate it is for configuration 1
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new beach file for configuration 2
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Commits on Jun 7, 2023

new file for adding lateral transport into outwasher
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Commits on Jun 12, 2023

updating lateral transport
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creating the second beach domain
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Commits on Jun 13, 2023

added nan to num
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Commits on Jun 19, 2023

added beta to outwasher inputs
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Commits on Jun 20, 2023

renamed to include configuration # in name
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storm series that include a year 1 outwash storm and occur every 10 and 20 years
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editing to load and save configuration 3
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Commits on Jun 21, 2023

updated to include lateral transport
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calling outwasher file instead of outwasher_lateral_transport file
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moved to outwash_ms folder
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outputting more erosion values
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reformatting some of the code
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Commits on Jun 22, 2023

new notebook for creating synthetic storms for NCB
anardek
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moved flow routing to separate function; added beach width variable for nourishment
anardek
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added the cascade elevation function that has constant frame of reference
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Merge remote-tracking branch 'origin/avanblunk-cascade' into avanblunk-cascade
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edited b3d.nn to b3d._nn
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Commits on Jun 26, 2023

all deleted files
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all deleted files
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new storm files with more descriptive names
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outwasher notebooks
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old storm and domain files
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updated the code to make the storm series based on a given start year
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moved
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Commits on Jun 27, 2023

Commits on Jun 28, 2023

got rid of SimFrames folder for gif plotter
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changed print statements
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Commits on Jul 6, 2023

new synthetic storms for NCB described in ntbk
anardek
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new synthetic storms for NCB described in ntbk
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Merge remote-tracking branch 'origin/avanblunk-cascade' into avanblunk-cascade
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configuration 4 files
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outwash storm that only occurs at year 1
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notebooks for each configuration and dune growth
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notebooks for loading and plotting results
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edited when extracting configuration 4
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Commits on Jul 7, 2023

updated for mean and std
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Merge remote-tracking branch 'origin/avanblunk-cascade' into avanblunk-cascade
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flipped domain left-right in plotter to get correct orientation
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committing katherine's edited file to see if it will update locally (I have not edited this file at all, local history does not exist, and Git --> history only shows katherines changes)
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new 100 year storm series for NCB and respective beach elevations
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file for testing new storm series against previous storm series
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file for testing new storm series against previous storm series
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Commits on Jul 10, 2023

new storm series with the 0.03 and 0.002 slopes including year 100 in the dataset
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downloaded katherines most recent version of the NCB synthetic storms
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Commits on Jul 11, 2023

100 storms for each slope (0.002 and 0.03)
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Commits on Jul 12, 2023

added true/false for outputting plots
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Commits on Jul 14, 2023

run file for running CASCADE for all 4 outwash events and 100 storm series
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removed substep as an input since we want it to stay 100 throughout
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Commits on Jul 17, 2023

running config4 with the average values
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copied into the folder with all my new overwash storms
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plotting various variables
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updated for printing spacing
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copied over for running with new storms
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moved to old folder for now (will delete that folder eventually)
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deleted
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jupyter notebook for running different slope
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moved to this folder
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moved to old folder for now (will delete folder later)
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jupyter notebook with yearly_storms function: updated the function to change the save directory (did not make any changes to the python file itself)
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added the storms folder that contains the two sets of 100 storms (NCB storms with slopes 0.03 and 0.002) and the .npz files for the run_output from the slope 0.03 storms
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run files for the overwash only and 100% washout to shroeface scenario. includes a loop through all 100 storms, can copy and paste code into python console to break up the time range into incrememe…
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moved datadir specification up in the code and added two save_dir locations per scenario
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deleted some print statements
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Commits on Jul 21, 2023

commented out ore removed the "self" from variables that were giant arrays
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commented out or removed the "self" from variables that were giant arrays
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jupyter notebook for editing saved cascade npz files to change the big arrays to empty arrays
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Commits on Jul 26, 2023

file for loading the npz files for each scenario and all storms to get the drowning data
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edited final beach elevation variable
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making the subplots that show pre-storm, post-storm, and elevation change figures
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saving the run
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updated to save to one place only
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Commits on Jul 27, 2023

removed substep, Ki, and C from init and input into outwasher
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cleaning up code: more comments and removing variables that are not actually needed
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Commits on Jul 28, 2023

fully organized and commented outwasher code
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Commits on Aug 2, 2023

updated comments and variable names for readability
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added some extra explanation for lateral transport calculations and arrays
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Commits on Aug 3, 2023

Commits on Aug 6, 2023

un-commented some sections of the code
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Commits on Aug 8, 2023

removed variables that are no longer inputs into cascade
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Commits on Aug 10, 2023

updated for r = 0.35
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Commits on Oct 12, 2023

added KA's local directory for simulations on her machine
anardek
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Commits on Nov 10, 2023

updated for r = 0.35, outwash = 50%
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Commits on Feb 25, 2024

added code for plotting the shoreline position, shoreface slope, average interior height and width, and overwash/outwash fluxes
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Commits on Mar 1, 2024

script for plotting the dune crest time series for Outwasher, both dune growth rates, 1 example storm
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script for plotting the full 2D elevations before and after each outwash event
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Commits on Mar 15, 2024

updated to create a loop for each dune growth rate to halve the amount of text
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Commits on Mar 19, 2024

added min, mean, and max stats for shoreline position and barrier drowning. Created a stacked bar chart for barrier drowning years
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Commits on Mar 22, 2024

editing plot graphics, still not perfect
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Commits on Apr 3, 2024

edited the code so that the drown years correlated with the first occurance of drowning (when shoreline position becomes nan)
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Commits on Apr 14, 2024

added a check for barrier drowning post outwash event
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Commits on Apr 15, 2024

Merge remote-tracking branch 'origin/avanblunk-cascade' into avanblunk-cascade
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renamed, merged with katherine's changes (but back to r=0.25)
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added stacked dune crest figures
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Commits on May 7, 2024

adjusted figure labels and colors
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moved folder
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updated outwash output to gitignore after moving the folder
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Commits on May 13, 2024

updated datadir locations to rerun folder and the updated location of the data file (within CASCADE/data not CASCADE/cascade/data)
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Commits on May 14, 2024

moved to different location
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removed OW_TS variable because it was not used
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updated the default dune and elevation files to configuration 4
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Commits on May 20, 2024

added average outwash and overwash calculations
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Commits on May 23, 2024

edited some variables for runs
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added code for finding the percent barriers drowned by year (total, not by outwash scenario)
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Commits on Mar 17, 2025

Commits on Mar 18, 2025

updated outwash and overwash flux stats. starting documenting a little more
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Commits on Mar 21, 2025

Commits on Mar 22, 2025

aded figures 9-10 for single storm events (shoreline position, overwas/outwash flux)
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Commits on Mar 28, 2025

added text to elevation plots to include outwash flux and tested some different years
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Commits on Apr 25, 2025

minor edits, added the year specification for the overwash and shoreline position figures.
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Commits on May 11, 2025

updated the dune plot for the terrain colormap. updated the elevation subplots to start the y-axis at 0
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Commits on May 16, 2025

this code takes the average of the entire domain for each time step rather than filtering out the cells below sea level
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Commits on Jun 8, 2025

changed the dune plot to be normal elevatio rather than height above berm (added the berm elevation)
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added width calcs and edited the average interior elevation calculation which only calculates averages of the barriers that DO NOT DROWN
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testing width calcs, just uncommented the rname_array
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Commits on Jun 14, 2025

Commits on Jun 27, 2025

changed title of shoreline and overwash figures
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added a variable to save the post-outwah domain at all outwash model timesteps (not just the final outwash event)
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renamed variable
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Commits on Oct 2, 2025

turning variables on and off
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adding comments
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uncommenting lines for testing
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Commits on Oct 20, 2025

changed outwash storm file to "outwash_storms_startyr_1_interval_20yrs.npy"
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files for outwash storms, beach domain, and dune growth params
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Commits on Nov 21, 2025

file for running outwasher, minor changes to naming and washout_array order
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updated to include:
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Commits on Nov 22, 2025

moved all these into a the for_thesis folder
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file for running CASCADE with outwash. has all three outwash to shoreface scenarios. changed storm_num range to full 100
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file for running CASCADE with NO outwash (module set to false). currently has Katherine's directories for pulling and saving variables
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this is a simplified version (less inputs required) of the outwash_plotters script
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removed variables no longer used, and moved relevant code from here to the new journal_results.py file
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compiled all analysis for the journal article into this file. all old and unnecessary calculations were removed.
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moved relevant code to journal_results.py so these files are no longer necessary
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Commits on Jan 4, 2026

moved relevant code to journal_results.py and moved this file to OLD
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added dune gap analysis code
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moved to OLD folder
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removed code for figures since they were old ones
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added .png file type to plot_Elev_CASCADE_subplots
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added space for the overwash flux and shoreline position files
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moved to OLD
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updated to include scripts/outwash_ms/OLD
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moved to OLD for now
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moved to OLD
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Commits on Feb 17, 2026

edited datadir
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Commits on Feb 21, 2026

added lines for the dune_gap limit
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Commits on Mar 5, 2026

Commits on Mar 6, 2026

these two files may help users convert their data into usable domains for running CASCADE
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[pre-commit.ci] auto fixes from pre-commit.com hooks
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changed the name convention for easier interpretation and deleted unnecessary content
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updated for new datadirs and for easier comprehension
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Merge remote-tracking branch 'origin/outwasher_pull_request' into outwasher_pull_request
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[pre-commit.ci] auto fixes from pre-commit.com hooks
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deletions
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Merge remote-tracking branch 'origin/outwasher_pull_request' into outwasher_pull_request
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moved to outwasher data folder which only incldues files that another user would need to run CASCADE with outwasher module
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