Make Pasta-ELN 1.2+20260923 compliant - #168
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SteffenBrinckmann wants to merge 7 commits into
Open
SteffenBrinckmann wants to merge 7 commits into
SteffenBrinckmann wants to merge 7 commits into
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Tooling - Replace pip/requirements.txt with uv: pyproject.toml with dependency groups (test, tools, docs) and a locked uv.lock; update CI workflows, CONTRIBUTING.md and docs/README.md accordingly - Update all Python libraries, including roc-validator 0.5.0 -> 0.11.3 Checks (tests/checks/) - Split tests/checks.py into one class per check, sharing run/extract/logging logic in BaseCheck; each check runs independently - Determine the version from the root conformsTo; consortium checks (archive structure, metadata parameters, schema) run only on 1.2+202609, while validator and PyPI rocrate run on all versions - Readable schema.json error output Tests - Consolidate the per-check test files into tests/test_00_main.py - tests/run_checks.py runs all checks on one file; --no-recommend limits validation to REQUIRED rules Tools and docs - Rename the Streamlit app tools/checkELN.py -> tools/run_streamlit.py - Add tools/eln2preview.py to embed an HTML preview in an .eln file - Add tests/README.md and tests/MakeIt1.2+202609Compliant.md describing the checks and how to make an export 1.2+202609 compliant
# Conflicts: # tests/README.md # tests/checks/archive_structure.py # tests/checks/param_metadata_json.py # tests/checks/schema.py # tests/checks/validator.py # tests/checks/versions.py
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Requires #159 to be merged first