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Updates needed to build MARBL with nvhpc#67

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mnlevy1981 wants to merge 2 commits into
TURBO-ESM:mainfrom
mnlevy1981:marbl_nvhpc
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Updates needed to build MARBL with nvhpc#67
mnlevy1981 wants to merge 2 commits into
TURBO-ESM:mainfrom
mnlevy1981:marbl_nvhpc

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@mnlevy1981
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Description

  1. Updated MARBL external to latest version (has some updates needed for nvhpc)
  2. Updated build.sh to use nvhpc/25.9 on derecho (includes bugfix necessary for building MARBL)

I also hardcoded TURBO account key in job-derecho.sh

Type of Change

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Breaking change (fix or feature that would cause existing functionality to not work as expected)
  • Documentation update
  • Code maintenance (refactoring, optimization, etc.)
  • CI/CD changes

Related Issues

Fixes #59

Testing

Build MOM6 with nvhpc, run the cesm_t232_marbl example with resulting executable

Test Environment

  • Tested on derecho
  • Tested locally
  • Other: _______________

Compiler(s) Tested

  • Intel
  • GNU
  • NVHPC
  • Other: _______________

Test Cases

  • cesm_t232_marbl
  • All existing tests pass
  • New tests added and pass
  • Manual testing performed
  • Examples run successfully

Checklist

  • My code follows the project's coding standards
  • I have performed a self-review of my own code
  • I have commented my code, particularly in hard-to-understand areas
  • I have made corresponding changes to the documentation
  • My changes generate no new warnings or errors
  • I have added tests that prove my fix is effective or that my feature works
  • New and existing unit tests pass locally with my changes
  • Any dependent changes have been merged and published

1. Updated MARBL external to latest version (has some updates needed for nvhpc)
2. Updated build.sh to use nvhpc/25.9 on derecho (includes bugfix necessary for
building MARBL)
3. Hardcoded TURBO account key in job-derecho.sh
@mnlevy1981
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@alperaltuntas When I try to run the model, I get

FATAL from PE     3: MOM_file_parser : the parameter name 'DT' was found without define or undef. Line: 'DT
=' in file MOM_input.

MPICH ERROR [Rank 3] [job id badfc49e-9610-48fb-af61-417caeaac8f1] [Mon Oct 27 09:13:59 2025] [dec0088] - Ab
ort(1) (rank 3 in comm 0): application called MPI_Abort(MPI_COMM_WORLD, 1) - process 3

aborting job:
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 3

FATAL from PE     4: MOM_file_parser : the parameter name 'DT' was found without define or undef. Line: 'DT
=' in file MOM_input.

MPICH ERROR [Rank 4] [job id badfc49e-9610-48fb-af61-417caeaac8f1] [Mon Oct 27 09:13:59 2025] [dec0088] - Ab
ort(1) (rank 4 in comm 0): application called MPI_Abort(MPI_COMM_WORLD, 1) - process 4

aborting job:
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 4

and so on (513 FATAL errors, running on 512 cores and the message is repeated on task 0). Have you seen this error with nvhpc before? Did the 25.9 release regress a bugfix from a previous version of the compiler?

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github-actions Bot commented Apr 3, 2026

👋 Friendly reminder @alperaltuntas — this PR has had no activity for 7 days and is still awaiting your review. When you have a moment, please take a look!

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👋 Friendly reminder @alperaltuntas — this PR has had no activity for 7 days and is still awaiting your review. When you have a moment, please take a look!

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[Task]: Test marbl example with nvhpc/25.9

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