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first look at reparametrization#209

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pogudingleb wants to merge 46 commits intoident_funcsSciML/StructuralIdentifiability.jl:ident_funcsfrom ident-funcs-3SciML/StructuralIdentifiability.jl:ident-funcs-3Copy head branch name to clipboard

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Commits on Jul 7, 2023

• CompatHelper: bump compat for Nemo to 0.35, (keep existing compat)

  

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• CompatHelper: bump compat for AbstractAlgebra to 0.31, (keep existing compat)

  

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• Merge pull request #191 from SciML/compathelper/new_version/2023-07-07-00-09-51-400-03555099844

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• Merge pull request #192 from SciML/compathelper/new_version/2023-07-07-00-09-58-678-03672548251

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Commits on Jul 26, 2023

• CompatHelper: bump compat for Groebner to 0.4, (keep existing compat)

  

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Commits on Jul 27, 2023

• Merge pull request #199 from SciML/compathelper/new_version/2023-07-26-00-09-16-184-03836338823

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Commits on Sep 4, 2023

• Bump actions/checkout from 3 to 4

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Commits on Sep 7, 2023

• first look at reparametrization

  

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• Merge pull request #208 from SciML/dependabot/github_actions/actions/checkout-4

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• homogenization may be a solution

  

  Sasha Demin

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Commits on Sep 9, 2023

• new benchmarks wip

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Commits on Sep 10, 2023

• test github connection :)

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• fix benchmarking on Windows

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• Merge branch 'ident-funcs-3' of https://github.com/SciML/StructuralIdentifiability.jl into ident-funcs-3

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Commits on Sep 11, 2023

• add new benchmark results

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• add benchmark results

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• some benchmark results

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• remove bad benchmark table

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Commits on Sep 12, 2023

• add a descriptive error message

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• add more sescriptive error message

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• add new benchmark results

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Commits on Sep 13, 2023

• add more benchmarks results

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• fix column names in the benchmark table

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Commits on Sep 14, 2023

• CompatHelper: bump compat for Nemo to 0.36, (keep existing compat)

  

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• CompatHelper: bump compat for AbstractAlgebra to 0.32, (keep existing compat)

  

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• normal forms working

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• Merge pull request #210 from SciML/compathelper/new_version/2023-09-14-00-08-11-288-01308281315

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• Merge pull request #211 from SciML/compathelper/new_version/2023-09-14-00-08-20-734-00232789781

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• normalforms WIP

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Commits on Sep 15, 2023

• add benchmark results & clean the code

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• leave out only non-polynomial models

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• make formatter happy

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Commits on Sep 20, 2023

• bugfix in reparametrization

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• WIP: documentation

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Commits on Sep 22, 2023

• add simplification strategies, fix a bug

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Commits on Sep 29, 2023

• systems without parameters fix

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• uncommenting the St test

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• formatting

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• creating ODE doc page reworked

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Commits on Sep 30, 2023

• assess_identifiability with mtk: adding states if no parameters provided

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Commits on Oct 1, 2023

• Rearranging docs for identifiability and identifiable functions + keyword arguments in main functions

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• Updating README

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Commits on Oct 2, 2023

• formatter happy

  

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• Merge branch 'master' into ident-funcs-3

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• soften the phrasing of the warning on floats

  

  Sasha Demin

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• take variable names seriously

  

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