GitHub - SciLifeLab/modules.sf.net: Adhoc software "packaged" for the ancient and deprecated "module system" (http://modules.sf.net/)

This is just a placeholder for software "packaged" using the ancient and horribly deprecated module system:

The modules shown here are tailored for our specific environment and no support will be offered.

*** Use it at your own risk ***

You might want to adjust your MODULEPATH environment variable to load those custom/experimental modules, e.g.:

export MODULEPATH=$MODULEPATH:/bubo/home/h5/roman/opt/modules

Name		Name	Last commit message	Last commit date
Latest commit History 115 Commits
AlienTrimmer		AlienTrimmer
CRISP		CRISP
GATK		GATK
MuTect		MuTect
OLB		OLB
RNASeQC		RNASeQC
VarScan		VarScan
bamtools		bamtools
bcbio.variation		bcbio.variation
bcftools		bcftools
bgzip		bgzip
bismark		bismark
bowtie2		bowtie2
clc-adapter-trim		clc-adapter-trim
clojure		clojure
cmake		cmake
cutadapt		cutadapt
deactivated/ant		deactivated/ant
drmaa		drmaa
fastqc		fastqc
fastqscreen		fastqscreen
fastx_toolkit		fastx_toolkit
grabix		grabix
htseq		htseq
igvtools		igvtools
lein		lein
maven		maven
mosaik-aligner		mosaik-aligner
ngsrich		ngsrich
picard		picard
samtools		samtools
seqtk		seqtk
snpEff		snpEff
subread		subread
tabix		tabix
tophat		tophat
trim_galore		trim_galore
trimmomatic		trimmomatic
ucsc_tools		ucsc_tools
vcflib		vcflib
vcftools		vcftools
README.md		README.md

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