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use same package versions on cluster machines as source #273

use same package versions on cluster machines as source

use same package versions on cluster machines as source #273

Workflow file for this run

# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
on:
push:
branches:
- main
- development
pull_request:
branches:
- main
- development
name: R-CMD-check
jobs:
R-CMD-check:
if: "!contains(github.event.commits[0].message, '[skip-ci]')"
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: macOS-latest, r: 'release'}
- {os: windows-latest, r: 'devel'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-20.04, r: 'devel'}
- {os: ubuntu-20.04, r: 'release'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
steps:
- uses: actions/checkout@v3
- uses: r-lib/actions/setup-pandoc@v2
- name: Install Linux system dependencies
if: runner.os == 'Linux'
run: |
sudo add-apt-repository -y ppa:ubuntugis/ubuntugis-unstable
sudo apt-get update -y
sudo apt-get install -y libudunits2-dev libgdal-dev libgeos-dev libproj-dev libsqlite0-dev
- name: Install macOS system dependencies
if: runner.os == 'macOS'
run: |
brew install pkg-config
brew install gdal
- uses: r-lib/actions/setup-r@v2
with:
extra-repositories: 'https://r-spatial.r-universe.dev/'
Ncpus: 2
r-version: ${{ matrix.config.r }}
use-public-rspm: false
- name: Install sf from r-universe
run: |
install.packages("sf")
shell: Rscript {0}
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: |
any::rcmdcheck
any::sf
fastshp=?ignore
NLMR=?ignore
- name: Install additional package dependencies
run: |
pak::pkg_install("remotes")
pak::pkg_install("ropensci/NLMR")
remotes::install_github("s-u/fastshp")
shell: Rscript {0}
- uses: r-lib/actions/check-r-package@v2
- name: Show testthat output
if: always()
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash
- name: Upload check results
if: failure()
uses: actions/upload-artifact@main
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check