Callable workflow for Docker image build #6026
Workflow file for this run
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name: Docker GHA | |
on: | |
push: | |
branches: | |
- main | |
- develop | |
tags: | |
- "v*.*.*" | |
pull_request: | |
merge_group: | |
workflow_dispatch: | |
inputs: | |
r_version: | |
description: 'R version to use' | |
required: true | |
type: choice | |
default: "4.1" | |
options: | |
- 4.1 | |
- 4.2 | |
- 4.3 | |
- 4.4 | |
- devel | |
jobs: | |
# ---------------------------------------------------------------------- | |
# Set R version. | |
# This is a hack: We really just want a global env var here, but it seems | |
# `env:` values can't be passed into a `jobs.<jobid>.with` context | |
# (see https://github.com/actions/runner/issues/2372). | |
# As an ugly workaround, we assign it to a job output instead. | |
# ---------------------------------------------------------------------- | |
rversion: | |
runs-on: ubuntu-latest | |
steps: | |
- run: echo "null" | |
outputs: | |
R_VERSION: ${{ github.event.inputs.r_version || '4.1' }} | |
# ---------------------------------------------------------------------- | |
# depends image has all the dependencies installed | |
# ---------------------------------------------------------------------- | |
depends: | |
needs: rversion | |
uses: ./.github/workflows/docker-build-image.yml | |
with: | |
image-name: depends | |
build-context: docker/depends | |
dockerfile: docker/depends/Dockerfile | |
r-version: ${{ needs.rversion.outputs.R_VERSION }} | |
platforms: "linux/amd64" | |
secrets: inherit | |
# ---------------------------------------------------------------------- | |
# base image has PEcAn compiled and installed, and depends on depends | |
# ---------------------------------------------------------------------- | |
base: | |
needs: [rversion, depends] | |
uses: ./.github/workflows/docker-build-image.yml | |
with: | |
image-name: base | |
build-context: . | |
dockerfile: docker/base/Dockerfile | |
r-version: ${{ needs.rversion.outputs.R_VERSION }} | |
from-image: depends | |
platforms: "linux/amd64" | |
secrets: inherit | |
# ---------------------------------------------------------------------- | |
# models image has some python installed to run models, depends on base | |
# ---------------------------------------------------------------------- | |
models: | |
needs: [rversion, base] | |
uses: ./.github/workflows/docker-build-image.yml | |
with: | |
image-name: models | |
build-context: docker/models | |
dockerfile: docker/models/Dockerfile | |
r-version: ${{ needs.rversion.outputs.R_VERSION }} | |
from-image: depends # TODO is this correct? Dockerfile hardcodes FROM pecan/base | |
secrets: inherit | |
# ---------------------------------------------------------------------- | |
# Next are images that have models installed | |
# ---------------------------------------------------------------------- | |
modelsbinary: | |
needs: [rversion, models] | |
strategy: | |
fail-fast: false | |
matrix: | |
name: | |
- basgra | |
- biocro | |
# - ed2_2.2.0 | |
- ed2_git | |
- maespa | |
- sipnet | |
include: | |
- name: basgra | |
CONTEXT: models/basgra | |
DOCKERFILE: models/basgra/Dockerfile | |
PLATFORM: "linux/amd64" | |
MODEL: basgra | |
VERSION: BASGRA_N_v1 | |
- name: biocro | |
CONTEXT: models/biocro | |
DOCKERFILE: models/biocro/Dockerfile | |
PLATFORM: "linux/amd64" | |
MODEL: biocro | |
VERSION: "0.95" | |
# - name: ed2_2.2.0 | |
# CONTEXT: models/ed | |
# DOCKERFILE: models/ed/Dockerfile | |
# PLATFORM: "linux/amd64" | |
# MODEL: ed2 | |
# VERSION: "2.2.0" | |
- name: ed2_git | |
CONTEXT: models/ed | |
DOCKERFILE: models/ed/Dockerfile | |
PLATFORM: "linux/amd64" | |
MODEL: ed2 | |
VERSION: "git" | |
- name: maespa | |
CONTEXT: models/maespa | |
DOCKERFILE: models/maespa/Dockerfile | |
PLATFORM: "linux/amd64" | |
MODEL: maespa | |
VERSION: "git" | |
- name: sipnet | |
CONTEXT: models/sipnet | |
DOCKERFILE: models/sipnet/Dockerfile | |
PLATFORM: "linux/amd64" | |
MODEL: sipnet | |
VERSION: "git" | |
uses: ./.github/workflows/docker-build-image.yml | |
with: | |
image-name: model-${{ matrix.MODEL }}-${{ matrix.VERSION }} | |
build-context: ${{ matrix.CONTEXT }} | |
dockerfile: ${{ matrix.DOCKERFILE }} | |
r-version: ${{ needs.rversion.outputs.R_VERSION }} | |
# no `from-image:` needed here -- it's hardcoded as `FROM pecan/models` in the Dockerfiles | |
model-version: ${{ matrix.VERSION }} | |
platforms: ${{ matrix.PLATFORM }} | |
secrets: inherit | |
# ---------------------------------------------------------------------- | |
# Next are images that depend on base image | |
# ---------------------------------------------------------------------- | |
baseplus: | |
needs: [rversion, base] | |
strategy: | |
fail-fast: false | |
matrix: | |
name: | |
- docs | |
- executor | |
- api | |
include: | |
- name: docs | |
CONTEXT: . | |
DOCKERFILE: docker/docs/Dockerfile | |
PLATFORM: "linux/amd64" | |
- name: executor | |
CONTEXT: docker/executor | |
DOCKERFILE: docker/executor/Dockerfile | |
PLATFORM: "linux/amd64" | |
- name: api | |
CONTEXT: apps/api | |
DOCKERFILE: apps/api/Dockerfile | |
PLATFORM: "linux/amd64" | |
uses: ./.github/workflows/docker-build-image.yml | |
with: | |
image-name: ${{ matrix.name }} | |
build-context: ${{ matrix.CONTEXT }} | |
dockerfile: ${{ matrix.DOCKERFILE }} | |
r-version: ${{ needs.rversion.outputs.R_VERSION }} | |
platforms: ${{ matrix.PLATFORM }} | |
secrets: inherit | |
# ---------------------------------------------------------------------- | |
# Next are images that do not depend on either depends or base image | |
# ---------------------------------------------------------------------- | |
extras: | |
needs: rversion | |
strategy: | |
fail-fast: false | |
matrix: | |
name: | |
- web | |
- shiny-dbsync | |
- data | |
- monitor | |
- rstudio-nginx | |
include: | |
- name: web | |
CONTEXT: . | |
DOCKERFILE: docker/web/Dockerfile | |
PLATFORM: "linux/amd64,linux/arm64" | |
- name: shiny-dbsync | |
CONTEXT: . | |
DOCKERFILE: shiny/dbsync/Dockerfile | |
PLATFORM: "linux/amd64" | |
- name: data | |
CONTEXT: docker/data | |
DOCKERFILE: docker/data/Dockerfile | |
PLATFORM: "linux/amd64,linux/arm64" | |
- name: monitor | |
CONTEXT: docker/monitor | |
DOCKERFILE: docker/monitor/Dockerfile | |
PLATFORM: "linux/amd64,linux/arm64" | |
- name: rstudio-nginx | |
CONTEXT: docker/rstudio-nginx | |
DOCKERFILE: docker/rstudio-nginx/Dockerfile | |
PLATFORM: "linux/amd64,linux/arm64" | |
uses: ./.github/workflows/docker-build-image.yml | |
with: | |
image-name: ${{ matrix.name }} | |
build-context: ${{ matrix.CONTEXT }} | |
dockerfile: ${{ matrix.DOCKERFILE }} | |
platforms: ${{ matrix.PLATFORM }} | |
r-version: ${{ needs.rversion.outputs.R_VERSION }} |