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Novartis Experiments failing when calling calc_pdx_metrics.py on AWS

bugSomething isn't workingSomething isn't working

Status: Open.

#462 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Sep 11, 2025

Update adding dataset documentation in Contribution.md

Status: Open.

#461 In PNNL-CompBio/coderdata;

· alexandriai168 opened on Sep 4, 2025

coderdata documentation missing argument description for <code>balance</code>

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#457 In PNNL-CompBio/coderdata;

· sgosline opened on Aug 26, 2025

Depreciated function in build_drug_desc (GetMorganFingerprintAsBitVect)

'build' update

Status: Open.

#437 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Aug 4, 2025

·  

2.3

Add latest MPNST Data from Synapse

data update

Status: Open.

#394 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

Create script to process crown biosciences data

new dataRequest for additional data to be addedRequest for additional data to be added

Status: Open.

#368 In PNNL-CompBio/coderdata;

· sgosline opened on Apr 25, 2025

·  

2.3 new build

Automate push of the package to pypi upon new version via github actions

enhancementNew feature or requestNew feature or request

package

Status: Open.

Feature

#351 In PNNL-CompBio/coderdata;

· ymahlich opened on Apr 9, 2025

update documentation page to describe datasets

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#337 In PNNL-CompBio/coderdata;

· sgosline opened on Mar 26, 2025

·  

v2.2 Package Update

python code for mapping copy numbers to genes

'build' update

enhancementNew feature or requestNew feature or request

Status: Open.

#334 In PNNL-CompBio/coderdata;

· alexandriai168 opened on Mar 19, 2025

·  

2.3 new build

Consider adding boolean to determine if ec50 is valid

enhancementNew feature or requestNew feature or request

Status: Open.

#325 In PNNL-CompBio/coderdata;

· sgosline opened on Feb 20, 2025

Transition <code>print()</code> statements in API to <code>logging</code> module

enhancementNew feature or requestNew feature or request

package

Status: Open.

Feature

#317 In PNNL-CompBio/coderdata;

· ymahlich opened on Jan 30, 2025

·  

v2.2 Package Update

Download function is too slow

enhancementNew feature or requestNew feature or request

package

Status: Open.

#312 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jan 27, 2025

·  

v2.2 Package Update