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@OpenOmics

OpenOmics

Open Bioinformatics Research
README.md

Welcome to OpenOmics

GIF

We are a diverse group of Bioinformatics scientists, developers, and data scientists on a mission to push science forward.

We believe in open, reproducible, collaborative scientific research, and the strength of community led efforts. We recognize that together as a group we build strong. OpenOmics serves as a place to connect and engage with other community members, share ideas, and build pipelines & tools that enable the greater scientific community.

If you are a new member, welcome! Before getting started, please take a moment to read through our code of conduct. If you have any questions, please feel free to start a discussion.

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  1. genome-seek genome-seek Public

    Clinical Whole Genome and Exome Sequencing Pipeline

    Python 22 10

  2. RNA-seek RNA-seek Public

    Forked from skchronicles/RNA-seek

    A comprehensive quality-control and quantification RNA-seq pipeline

    Python 4 2

  3. modr modr Public

    An awesome Oxford Nanopore Pipeline for direct RNA-sequencing

    Python 5 1

  4. metavirs metavirs Public

    Viral Metagenomics Assembly and Annotation Pipeline

    Python 5 1

  5. cell-seek cell-seek Public

    One single-cell pipeline to rule them all, one pipeline to find them, one pipeline to unify them all, and with the data bind them.

    Python 1 1

  6. chrom-seek chrom-seek Public

    An awesome set of epigenetic pipelines for bulk cfChip-seq, ChIP-seq, and ATAC-seq

    Python 5 2

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