Repository navigation
feat: Phase I I10 wet-lab evidence annotation - #1026
Merged
Merged
Conversation
…s dry-lab predictions with WHR- outcomes; auto-computes prediction_confirmed/refuted/inconclusive; closes feedback loop
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
WEA-wet-lab evidence annotation schema (src/openamp_foundry/evidence/wetlab_evidence_annotation.py)prediction_outcomeauto-computed from predicted vs observed: prediction_confirmed / prediction_refuted / prediction_inconclusiveDesign
VALID_ACTIVITY_LABELS: active / inactive / inconclusive / not_testedINCONCLUSIVE_LABELS: inconclusive / not_tested — either label forces prediction_inconclusive outcomeis_preliminary_wet_lab=Trueby default (single assay, not yet confirmed multi-assay)dry_lab_only=True: the WEA- annotation record is computational metadata; WHR- holds the actual wet-lab datadry_lab_artifact_idreferences the original prediction;whr_id(WHR- prefix required) references the wet-lab resultSafety
Test plan