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Repositories

Showing 10 of 95 repositories
  • peakCombiner Public

    The fully R based tool peakCombiner is a user-friendly, transparent, modular and customizable package with the purpose to create a consensus peak file from genomic input regions. The aim is to allow even novice R users to create good quality combined peak sets to be used as the starting point for most downstream differential analyses.

    Novartis/peakCombiner’s past year of commit activity
    R 5 4 0 0 Updated Aug 22, 2025
  • torchsurv Public

    Deep survival analysis made easy

    Novartis/torchsurv’s past year of commit activity
    Python 149 MIT 13 7 1 Updated Aug 18, 2025
  • bamdd Public

    Applied modelling in drug development: flexible Bayesian regression modelling in Stan via brms

    Novartis/bamdd’s past year of commit activity
    HTML 22 GPL-2.0 6 0 0 Updated Aug 12, 2025
  • Causal-inference-in-RCTs Public

    This repository contains code examples for several methods in a Causal Inference in RCTs short course.

    Novartis/Causal-inference-in-RCTs’s past year of commit activity
    R 26 MIT 0 0 0 Updated Aug 1, 2025
  • attrib-path Public

    Parse a simplified JSONPath-like syntax

    Novartis/attrib-path’s past year of commit activity
    TypeScript 1 Apache-2.0 0 0 1 Updated Jul 22, 2025
  • monitOS Public

    Monitoring overall survival in pivotal trials for indolent cancer

    Novartis/monitOS’s past year of commit activity
    R 2 1 0 0 Updated Jul 21, 2025
  • xgxr Public

    R package for supporting exploratory graphics at http://opensource.nibr.com/xgx

    Novartis/xgxr’s past year of commit activity
    R 13 8 4 1 Updated Jul 12, 2025
  • pisces Public

    PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.

    Novartis/pisces’s past year of commit activity
    Python 30 Apache-2.0 3 10 2 Updated Jun 17, 2025
  • RBesT Public

    Tool-set to support Bayesian evidence synthesis in R

    Novartis/RBesT’s past year of commit activity
    R 23 GPL-3.0 2 0 0 Updated May 13, 2025
  • DRUG-seq Public

    DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline

    Novartis/DRUG-seq’s past year of commit activity
    R 32 MIT 12 0 0 Updated Mar 19, 2025
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