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  • University of California, Berkeley
  • Berkeley, CA

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@SharifAIChallenge

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  1. goodarzilab/cdsFM goodarzilab/cdsFM Public

    cdsFM: Repository of Codon-based Foundation Models

    Python 2

  2. theislab/cpa theislab/cpa Public

    The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell level. CPA performs OOD predictions of unseen combinations of dr…

    Python 89 17

  3. theislab/scarches theislab/scarches Public

    Reference mapping for single-cell genomics

    Jupyter Notebook 340 51

  4. theislab/trVAE theislab/trVAE Public

    Conditional out-of-distribution prediction

    Python 55 12

  5. theislab/scgen theislab/scgen Public

    Single cell perturbation prediction

    Python 272 56

  6. theislab/scArches-reproducibility theislab/scArches-reproducibility Public

    Reproducing result from the paper

    Jupyter Notebook 33