working on improved load / save / reset

sample_projects/rules_sample/Makefile

@@ -176,7 +176,7 @@ custom.o: ./custom_modules/custom.cpp
 reset:
 	rm -f *.cpp 
 	cp ./sample_projects/Makefile-default Makefile 
-	rm -f ./custom_modules/*
+	rm -rf ./custom_modules/*
 	touch ./custom_modules/empty.txt 
 	touch ALL_CITATIONS.txt 
 	touch ./core/PhysiCell_cell.cpp

todo.txt

@@ -0,0 +1,31 @@
+save: 
+	echo "Saving project as $(PROJ) ... "
+	mkdir -p ./user_projects
+	mkdir -p ./user_projects/$(PROJ)
+	mkdir -p ./user_projects/$(PROJ)/custom_modules
+	mkdir -p ./user_projects/$(PROJ)/config 
+	cp main.cpp ./user_projects/$(PROJ)
+	cp Makefile ./user_projects/$(PROJ)
+	cp VERSION.txt ./user_projects/$(PROJ)
+	cp ./config/* ./user_projects/$(PROJ)/config
+	cp ./custom_modules/* ./user_projects/$(PROJ)/custom_modules
+
+load: 
+	echo "Loading project from $(PROJ) ... "
+	cp ./user_projects/$(PROJ)/main.cpp .
+	cp ./user_projects/$(PROJ)/Makefile .
+	cp ./user_projects/$(PROJ)/config/* ./config/ 
+	cp ./user_projects/$(PROJ)/custom_modules/* ./custom_modules/ 
+
+
+reset:
+	rm -f *.cpp PhysiCell_cell.o
+	cp ./sample_projects/Makefile-default Makefile 
+	rm -f ./custom_modules/*
+	touch ./custom_modules/empty.txt 
+	touch ALL_CITATIONS.txt 
+	touch ./core/PhysiCell_cell.cpp
+	rm ALL_CITATIONS.txt 
+	cp ./config/PhysiCell_settings-backup.xml ./config/PhysiCell_settings.xml 
+	touch ./config/empty.csv
+	rm ./config/*.csv